; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08116 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08116
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationCarg_Chr04:2358063..2359874
RNA-Seq ExpressionCarg08116
SyntenyCarg08116
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454408.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]9.2e-3789.01Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQYAQPPP QQQ+SGPGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

XP_011652909.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]3.7e-3889.01Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQYAQPPPQQQ +SGPGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

XP_022149329.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]8.6e-3582.29Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA----------YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPP+GVPPPQGYPPEGYPKDA          YPPQGYPPPG+YP QGYPPPYAPQY QPPP QQQ+SGPGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA----------YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

XP_022942954.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]5.6e-42100Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

XP_038905303.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]1.6e-3686.81Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPP GYPPPYAPQYAQ PPQQQ +SGPGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0KWC5 Uncharacterized protein1.8e-3889.01Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQYAQPPPQQQ +SGPGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

A0A1S3BZB4 cysteine-rich and transmembrane domain-containing protein A-like4.5e-3789.01Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQYAQPPP QQQ+SGPGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

A0A6J1D5E9 cysteine-rich and transmembrane domain-containing protein WIH2-like4.2e-3582.29Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA----------YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPP+GVPPPQGYPPEGYPKDA          YPPQGYPPPG+YP QGYPPPYAPQY QPPP QQQ+SGPGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDA----------YPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

A0A6J1FSU9 cysteine-rich and transmembrane domain-containing protein WIH2-like2.7e-42100Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

A0A6J1JI08 cysteine-rich and transmembrane domain-containing protein WIH2-like2.7e-42100Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

SwissProt top hitse value%identityAlignment
P24603 Rhodopsin3.6e-0757.81Show/hide
Query:  SYYNQGQPPVGV--PPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQN
        +Y  QG PP G   PPPQGYPP+GYP   YPPQGYPP    PPQG PPP  P     PPQ   N
Subjt:  SYYNQGQPPVGV--PPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQN

Q17094 Rhodopsin (Fragment)3.6e-0760.34Show/hide
Query:  SYYNQGQPPVGV--PPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPP
        +Y  QG PP G   PPPQGYPP+GYP   YPPQGYPP    PPQG PP   P  A PP
Subjt:  SYYNQGQPPVGV--PPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPP

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B7.1e-1657Show/hide
Query:  NQGQPPVGVPPPQGYPPEGYPKDAYPP-------QGYPPPGSYPPQGYPPP-YAPQ------YAQ----PPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        +Q  P VGVPP   YP EG PKDAYPP       QGYPPP  YP QGYPP  Y PQ      Y Q    P  QQQQ   PG +EGC+AALCC C+LDACF
Subjt:  NQGQPPVGVPPPQGYPPEGYPKDAYPP-------QGYPPPGSYPPQGYPPP-YAPQ------YAQ----PPPQQQQNSGPGCMEGCLAALCCCCLLDACF

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH23.0e-3072Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPG--------------SYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MS YN  QPPVGVPPPQGYPPEGYPKDAYPPQGYPP G               YP QGYPPPYAPQY  PP  QQQ S PG +EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPG--------------SYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH12.1e-2068.97Show/hide
Query:  YNQGQPPVGVPPPQGYPP-EGYPKDAYPPQGYPPPG---SYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        Y+Q Q PVG PPPQGYPP +GYP   YPP GYPPPG    YP QGYPP   PQY+Q  PQQ+QN+  G +EGCLAALCCCCLLDACF
Subjt:  YNQGQPPVGVPPPQGYPP-EGYPKDAYPPQGYPPPG---SYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein2.1e-3172Show/hide
Query:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPG--------------SYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        MS YN  QPPVGVPPPQGYPPEGYPKDAYPPQGYPP G               YP QGYPPPYAPQY  PP  QQQ S PG +EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPG--------------SYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

AT3G49845.1 unknown protein1.2e-1549.51Show/hide
Query:  QGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPP-----GSYPPQGYPPPYAPQ---------------YAQPPPQQQQN--SGPGCMEGCLAALCCCCLLD
        +G PP G PPP GYPP  YP+  YPP GYPPP       YP QGYPPP  PQ               Y Q PP+ +++     G MEGCLA LCCC LL+
Subjt:  QGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPP-----GSYPPQGYPPPYAPQ---------------YAQPPPQQQQN--SGPGCMEGCLAALCCCCLLD

Query:  ACF
        ACF
Subjt:  ACF

AT4G33660.1 unknown protein2.4e-0650.7Show/hide
Query:  PPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDAC
        P   YP   YP     PQG PPP   PPQ YPPP  P    PPP++      G +EG LAALCCCCL+D C
Subjt:  PPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDAC

AT5G45350.1 proline-rich family protein2.4e-0651.61Show/hide
Query:  GQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPP----------PYAPQYAQPPP
        G PP G PPP  YPP GYP+  YP    PPPG+YPP GYPP          P AP Y   PP
Subjt:  GQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPP----------PYAPQYAQPPP

AT5G67600.1 unknown protein1.5e-2168.97Show/hide
Query:  YNQGQPPVGVPPPQGYPP-EGYPKDAYPPQGYPPPG---SYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF
        Y+Q Q PVG PPPQGYPP +GYP   YPP GYPPPG    YP QGYPP   PQY+Q  PQQ+QN+  G +EGCLAALCCCCLLDACF
Subjt:  YNQGQPPVGVPPPQGYPP-EGYPKDAYPPQGYPPPG---SYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTATAATCAAGGTCAGCCGCCGGTTGGAGTGCCTCCGCCTCAAGGTTATCCGCCAGAAGGTTATCCAAAGGATGCTTATCCGCCACAAGGCTATCCTCCTCC
CGGATCTTATCCGCCGCAGGGATACCCTCCGCCTTACGCTCCTCAGTACGCGCAACCTCCTCCTCAACAACAGCAGAACAGCGGCCCTGGTTGCATGGAAGGCTGTTTAG
CTGCGCTGTGCTGTTGCTGCCTGCTTGACGCTTGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
AAATTAAGTTGAATTAAGAAGACTGCTTAGAGATAAGCCTCCCCGGATTCGCAGCGAACAAACAAAACCCTCTCTCTCGGTAATCTCAACTCTTCTTTCTTGATTGTATA
TATAAATCCGACCAACGCTGTCTTCTCCATCAACACTTTCTCCTTCATTCGTTTCTCATTCTGTGAATCCGGCCGCTTTTGTCATCGTCTTCGTCGTCCGGCGGAGAAGG
TCATTGTCTGGTTTGGTTGTGTTCGTCGGGGGATTCATCGTCTGTGGTTGATTTCAAGAGGAAGAAGGGATGAGTTATTATAATCAAGGTCAGCCGCCGGTTGGAGTGCC
TCCGCCTCAAGGTTATCCGCCAGAAGGTTATCCAAAGGATGCTTATCCGCCACAAGGCTATCCTCCTCCCGGATCTTATCCGCCGCAGGGATACCCTCCGCCTTACGCTC
CTCAGTACGCGCAACCTCCTCCTCAACAACAGCAGAACAGCGGCCCTGGTTGCATGGAAGGCTGTTTAGCTGCGCTGTGCTGTTGCTGCCTGCTTGACGCTTGCTTCTAA
ACAGAAACATCCATTTACTATTATGCTGTGCTTCAAAGTCTTAAGAAGATCGATCTCTCAGTAAACTTTTCTCTGAATGCAAAGGAAAAAAGAAAAAAAATGGAAAAACA
ATCGAGTTGATGATTTAATTACTTGCGTTTTATTATAATATTTTAGTTTAGTGCTTGTTCTTCGTTTCCTCCTCTTCACCTCTCTACATTTTTCATAATAAATAACACCA
TCTCTCCCCAATTATCTGTTTTCTCTTTCGCTCTCTCTCTTGGTTTCCTATGATCGATGGGTTTCTTTTTGGATCATCTGTGTTCTTGAGATACGATTCCAAATTTTACA
GTTCATGATATTGGACTAACTCCATTGATATGATATACCTTGTTATGTTAGTGAAGTTTTTGGGTTTTCTTGTGAATCGCATCGTTTCGATTGGACTATACCCTTGAAAA
AATTAGACCTTCAAACCAGATTGCCTTTCAGAGATGTGGTGGCCAGCGAAGCAGAAGATATATGGTGAGTAGCGCAGTGGGTGCTCCTGCCCCGTCCTTGTCCCGCCCAC
CCACGGCATGTTGGTGTCGCATGCGGGCGCCATCGCATCATAACACCACGATTCTTCATGATGCCTTCAACGCTCCCCAACGTTTTAAATGATTATATTTGATGGCCCCG
ATCTTTTTAGAAAAATTGCTAATAATTCATAACAAAATATATATATATATA
Protein sequenceShow/hide protein sequence
MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF