CuGenDBv2

Gene ID	Carg08132
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger SWIM domain-containing protein 7
Genome location	Carg_Chr04:2447389..2449447
RNA-Seq Expression	Carg08132
Synteny	Carg08132
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0097196 - Shu complex (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600296.1 Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-66

98.48

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISG+PSGRS+FQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

KAG7030956.1 Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-66

100

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

XP_022942858.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata]

1.3e-66

99.24

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS+FQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

XP_022983272.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima]

1.5e-65

96.97

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS+FQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGAC+EVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

XP_023526305.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. pepo]

6.5e-66

97.73

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVK+ISG+PSGRS+FQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWG5 SWIM-type domain-containing protein

2.8e-62

93.18

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSAS + AEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVKKISG PS RS+FQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAAS+GACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

A0A1S3BZP2 zinc finger SWIM domain-containing protein 7

2.3e-61

91.67

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSAS + AEAVWK+IESTR VTDDQLSILHFLFGKNFERATRIVDQ GVKKISG PS RS+FQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAAS+GACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

A0A6J1D5Z4 zinc finger SWIM domain-containing protein 7

8.9e-61

90.15

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSAS + AEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPSGRS+FQVVGESRRKEEY CFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGA IE KVSDEELA+LLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

A0A6J1FSJ7 zinc finger SWIM domain-containing protein 7 isoform X2

6.4e-67

99.24

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS+FQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGACIEVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

A0A6J1J6W2 zinc finger SWIM domain-containing protein 7 isoform X2

7.0e-66

96.97

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS+FQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLAASLGAC+EVKVSDEELAILLSNL
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G33925.1 unknown protein

3.5e-49

67.42

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M+ + L A+AVW  IEST SVT++QLSIL  LFGKN E+ATRI+D+ GVKKISG PSGRS+FQVVGES+++EEYLCFP ++C CYSFFYD+V+RGE  CC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVKVSDEELAILLSNL
        KHQLAARLA+SLG   E++VSD+ LA++LS +
Subjt:  KHQLAARLAASLGACIEVKVSDEELAILLSNL

AT4G33925.2 unknown protein

5.2e-45

68.91

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Query:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC
        M+ + L A+AVW  IEST SVT++QLSIL  LFGKN E+ATRI+D+ GVKKISG PSGRS+FQVVGES+++EEYLCFP ++C CYSFFYD+V+RGE  CC
Subjt:  MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGACIEVK
        KHQLAARLA+SLG   E++
Subjt:  KHQLAARLAASLGACIEVK

Sequences

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CDS sequence

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ATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGATGATCAGCTTTCAATATTGCATTTCTTGTTTGGCAAGAACTT
CGAGCGAGCTACTCGGATTGTTGATCAAAGTGGAGTGAAGAAAATTTCAGGCGAGCCAAGCGGACGGTCCGTCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGT
ATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCT
TCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAACTGGCGATATTATTGTCCAATCTTTAG

mRNA sequence

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AATGGATTTAGATTATCCAATATTTCTATAAACAAAATTTAAAATCACACCCAGAAAAATTTGCTAATTTTTTACGAGGAATTTCCTCCAAAATGAGTGCGAGTACCCTC
GCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGATGATCAGCTTTCAATATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGAT
TGTTGATCAAAGTGGAGTGAAGAAAATTTCAGGCGAGCCAAGCGGACGGTCCGTCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAA
ACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATT
GAAGTTAAAGTATCTGATGAAGAACTGGCGATATTATTGTCCAATCTTTAGTGACTTTATCAAAGCCAAAGCTCTCAGTACTCAAAAGTTTGAGAGGTAATCGAACA

Protein sequence

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MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSVFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAA
SLGACIEVKVSDEELAILLSNL

Carg08132 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome