; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08162 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08162
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:2614177..2620712
RNA-Seq ExpressionCarg08162
SyntenyCarg08162
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600330.1 Autophagy-related protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.4e-0561.4Show/hide
Query:  VIALCLACKKIVTRSFHIEDGPGVNLVQASSKLCKSANVRSYLVRLTSSARGRAFVH
        VIALCLACKKIVTRSFHIEDGPGVN+ +      KS    S+ VR     R R FVH
Subjt:  VIALCLACKKIVTRSFHIEDGPGVNLVQASSKLCKSANVRSYLVRLTSSARGRAFVH
KAG7030985.1 hypothetical protein SDJN02_05023, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-60100Show/hide
Query:  MIAVSVIALCLACKKIVTRSFHIEDGPGVNLVQASSKLCKSANVRSYLVRLTSSARGRAFVHLLGPTITILAPGAIHFFMDFRPGSSRGQTKLTDFHQSN
        MIAVSVIALCLACKKIVTRSFHIEDGPGVNLVQASSKLCKSANVRSYLVRLTSSARGRAFVHLLGPTITILAPGAIHFFMDFRPGSSRGQTKLTDFHQSN
Subjt:  MIAVSVIALCLACKKIVTRSFHIEDGPGVNLVQASSKLCKSANVRSYLVRLTSSARGRAFVHLLGPTITILAPGAIHFFMDFRPGSSRGQTKLTDFHQSN

Query:  LDHIHQPYCSKEKQTHPAKY
        LDHIHQPYCSKEKQTHPAKY
Subjt:  LDHIHQPYCSKEKQTHPAKY
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCCGTCTCAGTCATTGCATTGTGCCTCGCCTGTAAAAAGATCGTGACACGCTCTTTTCATATTGAAGATGGACCTGGTGTAAATCTTGTCCAAGCATCCAGCAA
GTTGTGCAAATCCGCCAATGTCAGAAGTTACTTGGTCAGACTGACAAGTTCTGCTCGTGGACGGGCCTTCGTCCATCTCCTCGGGCCTACCATTACAATTTTGGCACCGG
GTGCAATTCATTTTTTCATGGATTTCAGACCTGGTTCCAGTCGGGGTCAAACAAAACTAACCGATTTCCACCAATCAAATTTAGACCACATCCACCAGCCTTACTGCTCA
AAAGAAAAACAAACTCATCCTGCAAAGTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGCCGTCTCAGTCATTGCATTGTGCCTCGCCTGTAAAAAGATCGTGACACGCTCTTTTCATATTGAAGATGGACCTGGTGTAAATCTTGTCCAAGCATCCAGCAA
GTTGTGCAAATCCGCCAATGTCAGAAGTTACTTGGTCAGACTGACAAGTTCTGCTCGTGGACGGGCCTTCGTCCATCTCCTCGGGCCTACCATTACAATTTTGGCACCGG
GTGCAATTCATTTTTTCATGGATTTCAGACCTGGTTCCAGTCGGGGTCAAACAAAACTAACCGATTTCCACCAATCAAATTTAGACCACATCCACCAGCCTTACTGCTCA
AAAGAAAAACAAACTCATCCTGCAAAGTATTGA
Protein sequenceShow/hide protein sequence
MIAVSVIALCLACKKIVTRSFHIEDGPGVNLVQASSKLCKSANVRSYLVRLTSSARGRAFVHLLGPTITILAPGAIHFFMDFRPGSSRGQTKLTDFHQSNLDHIHQPYCS
KEKQTHPAKY