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Carg08174 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08174
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionThionin-like protein
Genome locationCarg_Chr04:2683680..2684642
RNA-Seq ExpressionCarg08174
SyntenyCarg08174
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]2.7e-1379.63Show/hide
Query:  TTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        + VAILC +LLS A  TVSADAADCIDGCFTACVQKD+R MQRCE KC IKCGP
Subjt:  TTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP

KAE9595095.1 hypothetical protein Lalb_Chr18g0060771 [Lupinus albus]2.8e-1054.55Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE
        MK       + +L F++ S    TV++DA+DC+D C TACVQ+DTRLMQRC+ KC+IKCGPD+K E
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE

KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]6.3e-31100Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFEGEDIIA
        MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFEGEDIIA
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFEGEDIIA

XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]3.0e-1777.61Show/hide
Query:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPD K +
Subjt:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE

XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]2.4e-1467.11Show/hide
Query:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDTKFE
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPD K +
Subjt:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDTKFE

TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein1.8e-1577.97Show/hide
Query:  TTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE
        + VAILC +LLS A  TVSADAADCIDGCFTACVQKD+R MQRCE KC IKCGPD K E
Subjt:  TTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE

A0A151T7U7 Tubby-like F-box protein1.9e-0957.38Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        MKK  A    AI+  +++S+   +V  DA DCIDGC TACVQ+D+RL  RCEGKC+IKCGP
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP

A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X21.5e-1777.61Show/hide
Query:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPD K +
Subjt:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE

A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X11.2e-1467.11Show/hide
Query:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDTKFE
        M+KS AA   AILC +LLSA A  TVSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPD K +
Subjt:  MKKSTAATTVAILCFILLSA-AATTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDTKFE

A0A6A4NXS4 Uncharacterized protein1.3e-1054.55Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE
        MK       + +L F++ S    TV++DA+DC+D C TACVQ+DTRLMQRC+ KC+IKCGPD+K E
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25275.1 unknown protein1.4e-0745.45Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        MKK    T VA L  ++   ++  + A+A     DC DGC TACVQ+D R   RC+ KC I+CGPD
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD

AT1G25275.2 unknown protein5.2e-0743.94Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        MKK    T VA L  ++   ++  + A+A     DC DGC TACVQ+D     RC+ KC I+CGPD
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD

AT1G25275.3 unknown protein1.4e-0742.86Show/hide
Query:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE
        MKK    T VA L  ++   ++  + A+A     DC DGC TACVQ+D R   RC+ KC I+CGP   +E
Subjt:  MKKSTAATTVAILCFILLSAAATTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATCTACGGCAGCGACGACGGTGGCGATTCTGTGCTTCATCCTACTCTCTGCGGCAGCGACTACGGTTTCAGCCGACGCCGCAGACTGCATCGACGGCTGCTT
CACCGCCTGTGTCCAGAAAGACACGAGACTGATGCAGCGTTGTGAGGGCAAGTGCAGGATTAAATGCGGTCCAGATACTAAATTTGAAGGCGAAGATATTATTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATCTACGGCAGCGACGACGGTGGCGATTCTGTGCTTCATCCTACTCTCTGCGGCAGCGACTACGGTTTCAGCCGACGCCGCAGACTGCATCGACGGCTGCTT
CACCGCCTGTGTCCAGAAAGACACGAGACTGATGCAGCGTTGTGAGGGCAAGTGCAGGATTAAATGCGGTCCAGATACTAAATTTGAAGGCGAAGATATTATTGCTTAAA
AGCAACTGAGGAGAGAAATAAATAAGGAAATATAATTATAAATTAATGTTTCTCGTGTCTTAATAATCATTGTCGTGTTTGTAAACTCTAAAATCTCAGTAAGATTGTGT
AATGTTTTGTGTTTCTAATTAATATGTTTTTAAGTCTGGTTTGATAACTACTTAATCTTTTAGCGTTCATATTTTTTAAAAAAATATATTAAATTTTTTTAA
Protein sequenceShow/hide protein sequence
MKKSTAATTVAILCFILLSAAATTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDTKFEGEDIIA