CuGenDBv2

Gene ID	Carg08191
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	methyl-CpG-binding domain-containing protein 8-like
Genome location	Carg_Chr05:2574225..2574884
RNA-Seq Expression	Carg08191
Synteny	Carg08191
Gene Ontology terms	NA
InterPro domains	IPR037472 - Methyl-CpG-binding domain-containing protein 8

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6598690.1 Methyl-CpG-binding domain-containing protein 8, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-109

99.09

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Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVAS SNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGCEKRAAATEEEIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

KAG7029632.1 Methyl-CpG-binding domain-containing protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.0e-111

100

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Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGCEKRAAATEEEIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

XP_022961982.1 methyl-CpG-binding domain-containing protein 8-like [Cucurbita moschata]

3.9e-108

97.72

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Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVASPSNDSLRMNTLP+IDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QSS RLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQ NGNAAPNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGCEKRAAA EEEIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

XP_022997262.1 methyl-CpG-binding domain-containing protein 8-like [Cucurbita maxima]

4.3e-107

96.35

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Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVASPSND+LRMNTLP+IDLRRLSQSDLYCLSRFFSSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQ SSS SSSTFRS
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGCEKRAA  EEEIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

XP_023546077.1 methyl-CpG-binding domain-containing protein 8-like [Cucurbita pepo subsp. pepo]

2.2e-106

97.26

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Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVAS SNDSLRMNTLP+IDLRRLSQSDLYCLSRFFSSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGCEKR AA EEEIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BS27 methyl-CpG-binding domain-containing protein 8 isoform X2

3.6e-91

85.39

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Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVASPSN+S RMNTLP+IDLR LSQS+LYCLSR FSSSSSSTSQSN DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQ  SSSSSS  R 
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QS +RLD  SA+I+T  KQLFVGDSHC V++SYGD DEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSY PIKRRRGRPRKDSNRF QSNGNA PNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGCEKR  A EEEIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

A0A6J1BV99 methyl-CpG-binding domain-containing protein 8 isoform X1

1.2e-89

85.19

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Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVASPSN+S RMNTLP+IDLR LSQS+LYCLSR FSSSSSSTSQSN DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQ  SSSSSS  R 
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QS +RLD  SA+I+T  KQLFVGDSHC V++SYGD DEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSY PIKRRRGRPRKDSNRF QSNGNA PNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVM
        SGCEKR  A EEEIVM
Subjt:  SGCEKRAAATEEEIVM

A0A6J1HBJ5 methyl-CpG-binding domain-containing protein 8-like

1.9e-108

97.72

Show/hide

Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVASPSNDSLRMNTLP+IDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QSS RLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQ NGNAAPNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGCEKRAAA EEEIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

A0A6J1K4I5 methyl-CpG-binding domain-containing protein 8-like

2.1e-107

96.35

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Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVASPSND+LRMNTLP+IDLRRLSQSDLYCLSRFFSSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQ SSS SSSTFRS
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGCEKRAA  EEEIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

A0A6J1KK67 methyl-CpG-binding domain-containing protein 8-like isoform X2

4.4e-89

84.02

Show/hide

Query:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS
        MAS TMVASPS+D  RMNTLP+IDLR LSQS+LYCLSRF SSSSSS SQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK Q  SSSSSST R 
Subjt:  MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRS

Query:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK
        QS DR D  SA+IVT  KQLFVG+SHC VNDSY DGDEDLVLVNHIYDESVP+SSYAIF SIPVDIIDSSY PIKRRRGRPRKDSNRFAQSNGNAA NS 
Subjt:  QSSDRLDVGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSK

Query:  SGCEKRAAATEEEIVMVML
        SGC+KR  A E+EIVMVML
Subjt:  SGCEKRAAATEEEIVMVML

SwissProt top hits

e value

%identity

Alignment

Q9LME6 Methyl-CpG-binding domain-containing protein 8

8.2e-16

41.08

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Query:  SNDSLRMNTLPVIDLRRLSQSDLYCLSRFFS---SSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSDRLD
        + + L   +LP+ID R LSQS+L  LS+  S   SSS+S + S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ      S   +   S R +
Subjt:  SNDSLRMNTLPVIDLRRLSQSDLYCLSRFFS---SSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSDRLD

Query:  VGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYGPIKRRRGRPRKDSN
            Q+ + L+ LF  DS+ +  +   +G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  VGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYGPIKRRRGRPRKDSN

Arabidopsis top hits

e value

%identity

Alignment

AT1G22310.2 methyl-CPG-binding domain 8

5.8e-17

41.08

Show/hide

Query:  SNDSLRMNTLPVIDLRRLSQSDLYCLSRFFS---SSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSDRLD
        + + L   +LP+ID R LSQS+L  LS+  S   SSS+S + S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ      S   +   S R +
Subjt:  SNDSLRMNTLPVIDLRRLSQSDLYCLSRFFS---SSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSDRLD

Query:  VGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYGPIKRRRGRPRKDSN
            Q+ + L+ LF  DS+ +  +   +G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  VGSAQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYGPIKRRRGRPRKDSN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCAGAACTATGGTTGCTTCCCCTTCCAACGACAGTCTTCGCATGAACACTCTGCCGGTCATAGATCTCCGTCGCCTCTCCCAATCCGACCTCTATTGTCTTTC
TCGTTTCTTCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAGCGACGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAA
AACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAGCCCCAAATTTCTTCCTCCTCGTCCTCCTCCACATTTCGGTCCCAATCCTCCGACCGCCTAGATGTAGGCAGC
GCTCAGATTGTTACTCGCTTGAAGCAACTCTTCGTTGGAGATTCTCATTGTGCCGTCAACGACAGCTACGGCGACGGAGATGAGGACCTGGTCCTTGTTAACCACATTTA
CGACGAATCAGTACCTGATTCTTCCTACGCCATTTTCCAGAGTATTCCTGTTGATATTATCGATAGCAGTTATGGTCCGATTAAGCGGCGGAGAGGGCGACCGCGGAAGG
ACAGCAATCGGTTTGCTCAGAGTAATGGAAATGCCGCTCCGAACTCCAAAAGCGGCTGCGAAAAACGGGCGGCGGCGACGGAGGAGGAGATCGTAATGGTAATGCTGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MASRTMVASPSNDSLRMNTLPVIDLRRLSQSDLYCLSRFFSSSSSSTSQSNSDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQISSSSSSSTFRSQSSDRLDVGS
AQIVTRLKQLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRRGRPRKDSNRFAQSNGNAAPNSKSGCEKRAAATEEEIVMVML

Carg08191 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome