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Carg08239 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08239
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:2871876..2873102
RNA-Seq ExpressionCarg08239
SyntenyCarg08239
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598735.1 AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1150.5Show/hide
Query:  MKRIRKCLLIAFTSGLEVSRSSSGMEVKDEDK--------------------------------------------------NGPTETNAGLEFAMNTLK
        MKRIRKCLLIAFTSGLEVSRSSSGMEVKDEDK                                                  NGPTETNAGLEFAMNTLK
Subjt:  MKRIRKCLLIAFTSGLEVSRSSSGMEVKDEDK--------------------------------------------------NGPTETNAGLEFAMNTLK

Query:  V
        V
Subjt:  V
KAG7020247.1 Beta carbonic anhydrase 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.8e-0677.5Show/hide
Query:  KNGPTETNAGLEFAMNTLKVGYFPFFLLSNLIFIISRLNI
        +NGPTET A LEFA+NTLKVG FPFF+  NLIFIISRL+I
Subjt:  KNGPTETNAGLEFAMNTLKVGYFPFFLLSNLIFIISRLNI
KAG7029678.1 hypothetical protein SDJN02_08018 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-35100Show/hide
Query:  MKRIRKCLLIAFTSGLEVSRSSSGMEVKDEDKNGPTETNAGLEFAMNTLKVGYFPFFLLSNLIFIISRLNILLITECIYLMNS
        MKRIRKCLLIAFTSGLEVSRSSSGMEVKDEDKNGPTETNAGLEFAMNTLKVGYFPFFLLSNLIFIISRLNILLITECIYLMNS
Subjt:  MKRIRKCLLIAFTSGLEVSRSSSGMEVKDEDKNGPTETNAGLEFAMNTLKVGYFPFFLLSNLIFIISRLNILLITECIYLMNS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGCATCCGGAAGTGTCTTCTTATCGCATTCACGAGCGGGTTGGAGGTCTCGAGGAGCTCATCTGGCATGGAAGTGAAGGATGAAGATAAGAATGGACCAACTGA
AACCAATGCAGGCCTTGAATTTGCAATGAACACATTAAAAGTAGGCTATTTCCCATTCTTCTTGCTGTCAAATTTGATCTTTATCATCTCTAGGCTGAATATTCTTCTCA
TTACAGAGTGCATTTATTTGATGAATTCTTAA
mRNA sequenceShow/hide mRNA sequence
TATTTTTCATCCTTTTCTCATCATTTTCAGTTGGGAGAAATTCTGTTTCTGTGAGTTCTTCCACTTTCTGTTTCTTTGTTGTGCTGTAATCTTAGCGTTAGATTGGTTTT
TATTTCGATGGAATTCGGGATTTGAAGGAAGAAATCGATGAAACGCATCCGGAAGTGTCTTCTTATCGCATTCACGAGCGGGTTGGAGGTCTCGAGGAGCTCATCTGGCA
TGGAAGTGAAGGATGAAGATAAGAATGGACCAACTGAAACCAATGCAGGCCTTGAATTTGCAATGAACACATTAAAAGTAGGCTATTTCCCATTCTTCTTGCTGTCAAAT
TTGATCTTTATCATCTCTAGGCTGAATATTCTTCTCATTACAGAGTGCATTTATTTGATGAATTCTTAAGAGAACTAGTTTTATGCTCAAGGTTGAGAACATTTTAGTCC
TTGGCCACAGTAGCTGTGCTGGAATTCAGGGCCTTATGAGCATGGAAGATGATGCTATC
Protein sequenceShow/hide protein sequence
MKRIRKCLLIAFTSGLEVSRSSSGMEVKDEDKNGPTETNAGLEFAMNTLKVGYFPFFLLSNLIFIISRLNILLITECIYLMNS