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Carg08261 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08261
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c550
Genome locationCarg_Chr05:3004843..3006536
RNA-Seq ExpressionCarg08261
SyntenyCarg08261
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER40230.1 cytochrome c550 [Striga asiatica]4.0e-1439.04Show/hide
Query:  IEEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLSKEISFGISPLRKFPLSSRSI
        I E +   C+I+RFS FRLPI  G  P++R  LRS  TRLVA  ISGGI PEI F C  +SDKF    I   + PV   +  I  GI P +   L+   +
Subjt:  IEEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLSKEISFGISPLRKFPLSSRSI

Query:  SDVMFPIDRGISPSNIHVVNTIDFSFFNPEIFSEQLVIPEGKRPDN
        SD     + GISP         +F      +    L  P G  PD+
Subjt:  SDVMFPIDRGISPSNIHVVNTIDFSFFNPEIFSEQLVIPEGKRPDN

PON56471.1 hypothetical protein TorRG33x02_296220 [Trema orientale]4.4e-2138.59Show/hide
Query:  QRFGLPEKLSANPCLIKDIGIGPER-------------------------------------------IEEFNWFPCNITRFSFFRLPICGGTAPERRLL
        QR GLPEKLS NP LI+D GIGPE                                            IEEFN  PC  ++F+ F+LPI GG  PERRLL
Subjt:  QRFGLPEKLSANPCLIKDIGIGPER-------------------------------------------IEEFNWFPCNITRFSFFRLPICGGTAPERRLL

Query:  LRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFL----------SKEISFGISPLRKFPLSSRSISDVMFP
        L S  T+LVA EI  G TPEIL  C NNSDKF    IE  + P++ L                GI P ++  L+     D  FP
Subjt:  LRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFL----------SKEISFGISPLRKFPLSSRSISDVMFP

TrEMBL top hitse value%identityAlignment
A0A2P5C645 Uncharacterized protein2.1e-2138.59Show/hide
Query:  QRFGLPEKLSANPCLIKDIGIGPER-------------------------------------------IEEFNWFPCNITRFSFFRLPICGGTAPERRLL
        QR GLPEKLS NP LI+D GIGPE                                            IEEFN  PC  ++F+ F+LPI GG  PERRLL
Subjt:  QRFGLPEKLSANPCLIKDIGIGPER-------------------------------------------IEEFNWFPCNITRFSFFRLPICGGTAPERRLL

Query:  LRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFL----------SKEISFGISPLRKFPLSSRSISDVMFP
        L S  T+LVA EI  G TPEIL  C NNSDKF    IE  + P++ L                GI P ++  L+     D  FP
Subjt:  LRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFL----------SKEISFGISPLRKFPLSSRSISDVMFP

A0A5A7Q4V2 Cytochrome c5501.9e-1439.04Show/hide
Query:  IEEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLSKEISFGISPLRKFPLSSRSI
        I E +   C+I+RFS FRLPI  G  P++R  LRS  TRLVA  ISGGI PEI F C  +SDKF    I   + PV   +  I  GI P +   L+   +
Subjt:  IEEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLSKEISFGISPLRKFPLSSRSI

Query:  SDVMFPIDRGISPSNIHVVNTIDFSFFNPEIFSEQLVIPEGKRPDN
        SD     + GISP         +F      +    L  P G  PD+
Subjt:  SDVMFPIDRGISPSNIHVVNTIDFSFFNPEIFSEQLVIPEGKRPDN

A0A6N2LJ29 Uncharacterized protein9.7e-0629.14Show/hide
Query:  SANPCLIKDIGIGPERIEEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFL-----
        S NPC    +G+ P +  E     CN   F     P  GGT P++     +S   ++   I  GI PE L      +D+FL   +E  + PV+ L     
Subjt:  SANPCLIKDIGIGPERIEEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFL-----

Query:  -----SKEISFGISPLRKFPLSSRSISDVMFPIDRGISPSNIHVVNTIDFS
             S  ISFG+ P    P   R    + FP++ GI P  +     I  S
Subjt:  -----SKEISFGISPLRKFPLSSRSISDVMFPIDRGISPSNIHVVNTIDFS

A0A7C9AG34 Uncharacterized protein1.8e-0434.86Show/hide
Query:  NWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLSKEISFGISPLRKFPLSSRSISDVM
        NWF C  T   F       G +P+R LL    ++RL   +I  GI+P       NNS +            +  LS  IS GISP   F  SS S+ D+ 
Subjt:  NWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLSKEISFGISPLRKFPLSSRSISDVM

Query:  FPIDRGISP
        FP   GI P
Subjt:  FPIDRGISP

A0A7N0V1S0 Uncharacterized protein1.5e-1150.63Show/hide
Query:  EEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLS
        EE + FPCNI+  SF R PI  G   ERRL L S+FTR  A EIS G  PE +F   N+SDK     I F MEP ++L+
Subjt:  EEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRFLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATACGCCGGTGGAAGACAGAGATTTGGGTTGCCGGAGAAGCTATCGGCTAACCCTTGTTTGATCAAAGACATCGGAATCGGACCGGAAAGGATTGAAGAATTCAA
TTGGTTTCCTTGTAACATCACCAGATTTAGCTTCTTCAGGCTACCAATCTGCGGCGGCACTGCGCCGGAGAGGAGATTGTTACTGAGATCTAGCTTCACCAGATTGGTGG
CTGCTGAAATCTCCGGCGGGATAACTCCAGAAATCCTGTTTTTTTGTAAGAACAATTCCGACAAGTTTCTACCCTGTGAGATTGAATTTGAAATGGAACCAGTGAGGTTC
TTGAGCAAGGAGATTTCTTTTGGAATCTCTCCCTTGAGAAAATTCCCACTTAGTTCGAGATCAATAAGCGACGTCATGTTCCCGATCGATCGAGGGATTTCTCCGTCCAA
CATACATGTTGTCAACACCATAGATTTCAGCTTCTTCAATCCAGAGATCTTCTCAGAGCAGTTGGTGATTCCTGAGGGAAAACGCCCCGACAATCCGGTATCAGCGAGGC
GAAGAACTCTTAGTGATGGCAGAGCATACATCGTCCGGGAAGGTACCGGAGAGAGGGTGGCCGGAGATATCGATCCGAACGACATGACCGCCGTCATTGCAGCGGATTCC
AGTGAAATCCCAATTAGAGAGGAGCTCACCGGTGGCAGTTGTTTGCATGAGAAGGAAGAACTGGGACTGGTTGGCTATGGCGGCAGTAAGAGCTTGAGAAGAAGCAATGG
CGGAAGTGAAGAACAGAAGAAGAAAGAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATACGCCGGTGGAAGACAGAGATTTGGGTTGCCGGAGAAGCTATCGGCTAACCCTTGTTTGATCAAAGACATCGGAATCGGACCGGAAAGGATTGAAGAATTCAA
TTGGTTTCCTTGTAACATCACCAGATTTAGCTTCTTCAGGCTACCAATCTGCGGCGGCACTGCGCCGGAGAGGAGATTGTTACTGAGATCTAGCTTCACCAGATTGGTGG
CTGCTGAAATCTCCGGCGGGATAACTCCAGAAATCCTGTTTTTTTGTAAGAACAATTCCGACAAGTTTCTACCCTGTGAGATTGAATTTGAAATGGAACCAGTGAGGTTC
TTGAGCAAGGAGATTTCTTTTGGAATCTCTCCCTTGAGAAAATTCCCACTTAGTTCGAGATCAATAAGCGACGTCATGTTCCCGATCGATCGAGGGATTTCTCCGTCCAA
CATACATGTTGTCAACACCATAGATTTCAGCTTCTTCAATCCAGAGATCTTCTCAGAGCAGTTGGTGATTCCTGAGGGAAAACGCCCCGACAATCCGGTATCAGCGAGGC
GAAGAACTCTTAGTGATGGCAGAGCATACATCGTCCGGGAAGGTACCGGAGAGAGGGTGGCCGGAGATATCGATCCGAACGACATGACCGCCGTCATTGCAGCGGATTCC
AGTGAAATCCCAATTAGAGAGGAGCTCACCGGTGGCAGTTGTTTGCATGAGAAGGAAGAACTGGGACTGGTTGGCTATGGCGGCAGTAAGAGCTTGAGAAGAAGCAATGG
CGGAAGTGAAGAACAGAAGAAGAAAGAAGGCTGA
Protein sequenceShow/hide protein sequence
MKYAGGRQRFGLPEKLSANPCLIKDIGIGPERIEEFNWFPCNITRFSFFRLPICGGTAPERRLLLRSSFTRLVAAEISGGITPEILFFCKNNSDKFLPCEIEFEMEPVRF
LSKEISFGISPLRKFPLSSRSISDVMFPIDRGISPSNIHVVNTIDFSFFNPEIFSEQLVIPEGKRPDNPVSARRRTLSDGRAYIVREGTGERVAGDIDPNDMTAVIAADS
SEIPIREELTGGSCLHEKEELGLVGYGGSKSLRRSNGGSEEQKKKEG