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Carg08263 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08263
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr05:3021816..3022100
RNA-Seq ExpressionCarg08263
SyntenyCarg08263
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598761.1 EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-47100Show/hide
Query:  MIEVWLHAGLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP
        MIEVWLHAGLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  MIEVWLHAGLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP

XP_022131875.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia]9.8e-2468.09Show/hide
Query:  MVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHF--------------SALSSEDETSNYKPISWKCKCGNFIFNP
        M+R SQIGSRPPSCR RC+ CGG CEA+QVPV AL D  S QNQRK+R++HF               ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  MVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHF--------------SALSSEDETSNYKPISWKCKCGNFIFNP

XP_022996868.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]1.6e-3498.72Show/hide
Query:  GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK
        GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRD SSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK
Subjt:  GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK

XP_023546258.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]2.2e-36100Show/hide
Query:  GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK
        GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK
Subjt:  GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK

XP_038886514.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida]5.2e-2573.91Show/hide
Query:  GQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRT---THFS-------ALSSEDETSNYKPISWKCKCGNFIFNP
        G M+R +QIGSRPPSCR RC+ CGG CEAVQVPV AL D  SHQNQRK+RT   +HFS       ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  GQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRT---THFS-------ALSSEDETSNYKPISWKCKCGNFIFNP

TrEMBL top hitse value%identityAlignment
A0A0A0LPQ0 Epidermal patterning factor-like protein1.2e-2266.67Show/hide
Query:  GQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQ--NQRKRRTT---------HFSALSSEDETSNYKPISWKCKCGNFIFNP
        G M+R +QIGSRPPSCR +C+ CGG CEAVQVPV AL DS+ +Q   +RKRR++         H  ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  GQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQ--NQRKRRTT---------HFSALSSEDETSNYKPISWKCKCGNFIFNP

A0A5A7VH43 Epidermal patterning factor-like protein3.4e-2264.52Show/hide
Query:  GQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRR-----------TTHFSALSSEDETSNYKPISWKCKCGNFIFNP
        G M+R +QIGSRPPSCR +C  CGG CEAVQVPV AL DS+ +Q + +RR           + H  ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  GQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRR-----------TTHFSALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1BQW9 Epidermal patterning factor-like protein4.7e-2468.09Show/hide
Query:  MVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHF--------------SALSSEDETSNYKPISWKCKCGNFIFNP
        M+R SQIGSRPPSCR RC+ CGG CEA+QVPV AL D  S QNQRK+R++HF               ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  MVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHF--------------SALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1KC86 Epidermal patterning factor-like protein7.8e-3598.72Show/hide
Query:  GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK
        GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRD SSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK
Subjt:  GLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCK

A0A6J1KP85 Epidermal patterning factor-like protein2.0e-2264.21Show/hide
Query:  VRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRR----TTHFS------------ALSSEDETSNYKPISWKCKCGNFIFNP
        +R SQIGS+PPSCR RC+ CGG CEAVQVPVA     SSH+ QR+R      +HFS            ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  VRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRR----TTHFS------------ALSSEDETSNYKPISWKCKCGNFIFNP

SwissProt top hitse value%identityAlignment
Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 18.6e-0737.18Show/hide
Query:  SQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTH--FSALSSEDETSNYKPISWKCKCGNFIFNP
        +++GS PPSC  RC  C   C A+QVP    R   +  N           S  +  D+ SNYKP+ WKC C    +NP
Subjt:  SQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTH--FSALSSEDETSNYKPISWKCKCGNFIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 22.3e-1245.88Show/hide
Query:  QMVRSSQIGSRPPSC-RGRCKACGGRCEAVQVPV---AALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP
        +M+    IGSRPP C R RC++C G CEA+QVP      L    +  +     T H      +D T NYKP+SWKCKCGN I+NP
Subjt:  QMVRSSQIGSRPPSC-RGRCKACGGRCEAVQVPV---AALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP

Arabidopsis top hitse value%identityAlignment
AT3G13898.1 unknown protein7.0e-0431.94Show/hide
Query:  RSSQIGSRPPSCRGRCKACGGRCEAVQVP-VAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKC
        R  +IGS+PPSC  +C  C   CEA+Q P ++++   S H                    +NY+P  W+C C
Subjt:  RSSQIGSRPPSCRGRCKACGGRCEAVQVP-VAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKC

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)9.2e-0434.25Show/hide
Query:  GSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP
        GS PP+CR +C  C   C+ V VP+                      LS   E   Y P +W+CKCGN +F P
Subjt:  GSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP

AT4G37810.1 unknown protein1.7e-1345.88Show/hide
Query:  QMVRSSQIGSRPPSC-RGRCKACGGRCEAVQVPV---AALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP
        +M+    IGSRPP C R RC++C G CEA+QVP      L    +  +     T H      +D T NYKP+SWKCKCGN I+NP
Subjt:  QMVRSSQIGSRPPSC-RGRCKACGGRCEAVQVPV---AALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP

AT5G10310.1 unknown protein6.1e-0837.18Show/hide
Query:  SQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTH--FSALSSEDETSNYKPISWKCKCGNFIFNP
        +++GS PPSC  RC  C   C A+QVP    R   +  N           S  +  D+ SNYKP+ WKC C    +NP
Subjt:  SQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTH--FSALSSEDETSNYKPISWKCKCGNFIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAGGTTTGGCTGCATGCAGGGTTGGTGGAGGGGCAGATGGTGAGGAGTAGCCAAATAGGGTCACGGCCGCCGAGCTGCAGGGGAAGGTGCAAGGCGTGTGGAGG
GCGTTGTGAGGCGGTGCAAGTACCAGTGGCGGCGCTGCGTGATTCTTCTTCACATCAGAATCAAAGAAAAAGAAGAACAACCCATTTCTCTGCTCTGTCTAGTGAAGATG
AGACCTCTAATTACAAGCCGATCAGCTGGAAATGCAAATGTGGGAATTTCATCTTCAACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAGGTTTGGCTGCATGCAGGGTTGGTGGAGGGGCAGATGGTGAGGAGTAGCCAAATAGGGTCACGGCCGCCGAGCTGCAGGGGAAGGTGCAAGGCGTGTGGAGG
GCGTTGTGAGGCGGTGCAAGTACCAGTGGCGGCGCTGCGTGATTCTTCTTCACATCAGAATCAAAGAAAAAGAAGAACAACCCATTTCTCTGCTCTGTCTAGTGAAGATG
AGACCTCTAATTACAAGCCGATCAGCTGGAAATGCAAATGTGGGAATTTCATCTTCAACCCATGA
Protein sequenceShow/hide protein sequence
MIEVWLHAGLVEGQMVRSSQIGSRPPSCRGRCKACGGRCEAVQVPVAALRDSSSHQNQRKRRTTHFSALSSEDETSNYKPISWKCKCGNFIFNP