CuGenDBv2

Gene ID	Carg08282
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Translation initiation factor IF-2
Genome location	Carg_Chr05:3144564..3148722
RNA-Seq Expression	Carg08282
Synteny	Carg08282
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6598780.1 hypothetical protein SDJN03_08558, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-90

99.47

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Query:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
        MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
Subjt:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP

Query:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKP SKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
Subjt:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM

KAG7029719.1 hypothetical protein SDJN02_08061 [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-91

100

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Query:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
        MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
Subjt:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP

Query:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
Subjt:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM

XP_022962317.1 protein spalten-like [Cucurbita moschata]

6.4e-91

99.47

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Query:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
        MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
Subjt:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP

Query:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        ASEMAEFWMMEHGML PEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
Subjt:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM

XP_022996595.1 uncharacterized protein LOC111491788 [Cucurbita maxima]

4.0e-85

94.44

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Query:  MVSEPKSTVSKQKPGNQDGG-------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYE
        MVSEPK TVSKQKPGNQDGG       SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYE
Subjt:  MVSEPKSTVSKQKPGNQDGG-------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYE

Query:  SLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TNDSDDDDDNFILSPKRRKM
        SLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPK  SKPESSQRPQQPSKNGDLKAKQKV TNDSDDDDDNFILSPKRRKM
Subjt:  SLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TNDSDDDDDNFILSPKRRKM

XP_023546622.1 protein spalten-like isoform X1 [Cucurbita pepo subsp. pepo]

7.9e-89

98.95

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Query:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
        MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
Subjt:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP

Query:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDS  DDDNFILSPKRRKM
Subjt:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLY4 Uncharacterized protein

1.7e-68

78.95

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Query:  MVSEPKSTVSKQKPGNQDGG----------------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVT-TAKVREKKVYNLPGQKCDPPE
        MVS+PKST+SK KP   DGG                SIKNS PSSKHKSVS+VTK+EVKSKT SSSS+ TTKTTTT T TAKVREKKV+NLPGQK DPPE
Subjt:  MVSEPKSTVSKQKPGNQDGG----------------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVT-TAKVREKKVYNLPGQKCDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIK--SPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNF
        EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIK  S KP S+PESSQRPQ PSKNGD+KAK+K+ NDSDDDDD F
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIK--SPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNF

Query:  ILSPKRRKM
        ILSPKRRKM
Subjt:  ILSPKRRKM

A0A1S3BCG5 uncharacterized protein LOC103488185 isoform X1

1.3e-68

78.95

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Query:  MVSEPKSTVSKQKPGNQDGG----------------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVT-TAKVREKKVYNLPGQKCDPPE
        MVS+PKST+SK KP   DGG                SIKNS PSSKHKSVS+VTKSEVKSKT SSSS+ TTKTTTT T TAKVREKK++NLPGQK DPPE
Subjt:  MVSEPKSTVSKQKPGNQDGG----------------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVT-TAKVREKKVYNLPGQKCDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIK--SPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNF
        EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIK  S KP S+PESSQRPQ PSKNGD+KAK+K+ NDSDDDDD F
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIK--SPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNF

Query:  ILSPKRRKM
        ILSPKRRKM
Subjt:  ILSPKRRKM

A0A6J1GJC9 uncharacterized protein LOC111454380 isoform X1

3.1e-67

78.11

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Query:  MVSEPKSTVSKQKPGNQDGGS-----------IKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLR
        MVS+PK TVSK K G+QDGGS             +S  SSKHKSVSV+ KSEVKSKT +SSS+ TTK TT  +TAKVREKKV+NL GQK DPPEEREPLR
Subjt:  MVSEPKSTVSKQKPGNQDGGS-----------IKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLR

Query:  IFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRK
        IFYESLSKQI  SEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIKS KPPS+PESSQRPQQPSKNGDLKAK+K+TN+SDDDD++FILSPKRRK
Subjt:  IFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRK

Query:  M
        M
Subjt:  M

A0A6J1HCD9 protein spalten-like

3.1e-91

99.47

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Query:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
        MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP
Subjt:  MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIP

Query:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
        ASEMAEFWMMEHGML PEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM
Subjt:  ASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM

A0A6J1K794 uncharacterized protein LOC111491788

2.0e-85

94.44

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Query:  MVSEPKSTVSKQKPGNQDGG-------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYE
        MVSEPK TVSKQKPGNQDGG       SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYE
Subjt:  MVSEPKSTVSKQKPGNQDGG-------SIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYE

Query:  SLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TNDSDDDDDNFILSPKRRKM
        SLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPK  SKPESSQRPQQPSKNGDLKAKQKV TNDSDDDDDNFILSPKRRKM
Subjt:  SLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKV-TNDSDDDDDNFILSPKRRKM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G19990.1 unknown protein

1.1e-16

41.21

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Query:  NQDGGSIKNSNPSSKHKSV---SVVTKSEVK---SKTSSS--SSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEF
        + D   IK+S   S+ K V     + K + K   SK +SS   S+   K        K RE+KVY+LPGQK + P+ER+PLRIFYESL KQIP S+MA+ 
Subjt:  NQDGGSIKNSNPSSKHKSV---SVVTKSEVK---SKTSSS--SSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEF

Query:  WMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKS----PKPPSKPESSQRPQ---QPS-------KNGDLK---AKQKVTNDSDDDDDNFILSPKRRK
        W+ME G+L  EKAKK  EKKL  QK  +  +P+KS    P+  SK  + ++ +    PS       K  D K    K+K  +D DD DD+F+ S   +K
Subjt:  WMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKS----PKPPSKPESSQRPQ---QPS-------KNGDLK---AKQKVTNDSDDDDDNFILSPKRRK

AT5G11600.1 unknown protein

8.3e-36

53.27

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Query:  SEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVT--KSEVKSKTSSSS-------SRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYE
        S+P+S+VS     ++     K   P +  K+++  +   S VK K  ++S       ++ T+ T + V     REKKVY+L GQK DPPEEREPLRIFYE
Subjt:  SEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVT--KSEVKSKTSSSS-------SRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYE

Query:  SLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKS-PKPPSKPESSQRPQQPSKNG-DLKAKQKVTNDSDDDDDNFILSPKRRKM
        SLSKQIP SEMAEFW+MEHGMLSPEKAK+A+EKK R+ K+ R GTP KS P   SK ESSQR      NG D + K+KV +D DDDDD+FILS KRRK+
Subjt:  SLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKS-PKPPSKPESSQRPQQPSKNG-DLKAKQKVTNDSDDDDDNFILSPKRRKM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTTCAGAGCCCAAATCCACTGTTTCGAAGCAAAAACCTGGTAATCAAGATGGCGGCTCCATCAAGAACTCAAATCCTTCTTCCAAACACAAATCCGTCTCTGTTGT
CACTAAATCCGAGGTGAAGTCAAAGACAAGTTCGAGTTCTTCAAGGGCGACAACAAAAACTACTACAACAGTTACTACTGCTAAAGTGAGAGAAAAGAAAGTGTATAATT
TGCCTGGTCAGAAATGTGATCCACCTGAAGAGAGAGAGCCCCTTCGGATATTTTACGAGTCCTTGTCGAAACAGATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATG
GAGCACGGCATGTTATCACCCGAAAAGGCGAAAAAGGCATACGAGAAGAAACTAAGAAGACAAAAGGAACAGAGATCCGGGACTCCGATTAAATCACCAAAACCGCCGAG
CAAACCAGAGAGTTCGCAGAGGCCACAGCAACCCTCTAAGAATGGCGATCTAAAAGCAAAGCAAAAGGTCACGAACGATAGCGACGACGACGACGACAACTTCATTCTAA
GTCCCAAGAGAAGGAAAATGTAG

mRNA sequence

Show/hide mRNA sequence

TCGTTTTCGCCTAAATTTATTTTTGTTTTTCCTATTCTGAAGCAAGTTCTTCAGCTTGGGAAGGAAGGAGTGTTAAGAACAAGGAAGACGGGAGGAAGAAGGTTGTTTCT
TCTGACATAGAGCCTAATCAATAGGCAAAAATCCTAAAACCTAAAACCAATTATGGTTTCAGAGCCCAAATCCACTGTTTCGAAGCAAAAACCTGGTAATCAAGATGGCG
GCTCCATCAAGAACTCAAATCCTTCTTCCAAACACAAATCCGTCTCTGTTGTCACTAAATCCGAGGTGAAGTCAAAGACAAGTTCGAGTTCTTCAAGGGCGACAACAAAA
ACTACTACAACAGTTACTACTGCTAAAGTGAGAGAAAAGAAAGTGTATAATTTGCCTGGTCAGAAATGTGATCCACCTGAAGAGAGAGAGCCCCTTCGGATATTTTACGA
GTCCTTGTCGAAACAGATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCACGGCATGTTATCACCCGAAAAGGCGAAAAAGGCATACGAGAAGAAACTAAGAA
GACAAAAGGAACAGAGATCCGGGACTCCGATTAAATCACCAAAACCGCCGAGCAAACCAGAGAGTTCGCAGAGGCCACAGCAACCCTCTAAGAATGGCGATCTAAAAGCA
AAGCAAAAGGTCACGAACGATAGCGACGACGACGACGACAACTTCATTCTAAGTCCCAAGAGAAGGAAAATGTAGGGAGAACACACCCGCCCTGCCTTCGTTCTTTATTA
TCATACTTTTCGAGGAATTACTTGATTAAAATTTCCTTAGAGTTGATGATTATAACCCAACAGTATTTACCTGGACATTCTTTTATACTCCACAGCTGTGTATGAACAAT
AATTTTAGAAGAGACGAGTCTTATGGTTCAAGTCCTTTTC

Protein sequence

Show/hide protein sequence

MVSEPKSTVSKQKPGNQDGGSIKNSNPSSKHKSVSVVTKSEVKSKTSSSSSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWMM
EHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKPPSKPESSQRPQQPSKNGDLKAKQKVTNDSDDDDDNFILSPKRRKM

Carg08282 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome