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Carg08285 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08285
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin-conjugating enzyme E2
Genome locationCarg_Chr05:3169824..3173069
RNA-Seq ExpressionCarg08285
SyntenyCarg08285
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0043328 - protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0035091 - phosphatidylinositol binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR023313 - Ubiquitin-conjugating enzyme, active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1871641.1 hypothetical protein Lal_00020435 [Lupinus albus]5.6e-6197.44Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLA SVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

KAG7029722.1 Protein PEROXIN-4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-62100Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

KYP65178.1 putative ubiquitin carrier protein E2 21 [Cajanus cajan]5.6e-6197.44Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLA SVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

XP_022857422.1 protein PEROXIN-4-like [Olea europaea var. sylvestris]2.5e-6197.44Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGD+RGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

XP_022962320.1 protein PEROXIN-4-like [Cucurbita moschata]1.9e-6198.29Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

TrEMBL top hitse value%identityAlignment
A0A0B2QDV8 Protein PEROXIN-42.7e-6197.44Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLA SVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

A0A6J1HEQ0 protein PEROXIN-4-like9.3e-6298.29Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

A0A6J1K2D7 protein PEROXIN-4-like9.3e-6298.29Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

A0A6J1KTV6 protein PEROXIN-42.7e-6197.44Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLA SVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

A0A6P4BYD2 protein PEROXIN-42.7e-6197.44Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETPFEGGVFQLA SVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
        QSMARMYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

SwissProt top hitse value%identityAlignment
O60015 Ubiquitin-conjugating enzyme E2-21 kDa5.5e-2743.41Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLT----------------------KIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHP
        ++GP ++PFE  +++L + +P  YPL PP+++F+                       K+ HPNV+FKTGEICLDIL+  WSPAWTLQS   AI+ L+A+P
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLT----------------------KIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHP

Query:  EPDSPLNCDSGNLLRSGDVRGYQSMARMY
        EP SPLN D  NLL+  D   Y+ +   Y
Subjt:  EPDSPLNCDSGNLLRSGDVRGYQSMARMY

Q86IZ3 Ubiquitin-conjugating enzyme E2 pex41.4e-4368.18Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GP +TP+E G F+L +SVP  YPLQPP ++F+TKIFHPN+HFKTGEICLD+LK +WS  +TLQSVCR+IIAL++ PE DSPLNCD+GNL+R+GDV+G+
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRL
         S+ARMYTRL
Subjt:  QSMARMYTRL

Q8LGF7 Protein PEROXIN-42.6e-6193.16Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETP+EGGVFQLA SVPE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRG+
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
         SMA+MYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

Q9EQX9 Ubiquitin-conjugating enzyme E2 N5.1e-2550.45Show/hide
Query:  GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQS
        GP ++PFEGG F+L L +PE+YP+  P+VRF+TKI+HPNV  K G ICLDILK+ WSPA  +++V  +I AL++ P PD PL  D     +S + +  ++
Subjt:  GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQS

Query:  MARMYTRLAAM
         AR +TRL AM
Subjt:  MARMYTRLAAM

Q9P6I1 Ubiquitin-conjugating enzyme E2 163.1e-3052.17Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GP+ETP+EGG + L + V E YP+ PP V F TKI HPN+ +  GE+C+DILK  WSPAW+LQS C AII+L+++ +  SPLN D+  LLR+GD   Y
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPK
         S+ R  T L A  K
Subjt:  QSMARMYTRLAAMPK

Arabidopsis top hitse value%identityAlignment
AT1G16890.1 ubiquitin-conjugating enzyme 366.9e-2548.18Show/hide
Query:  GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQS
        GP+++P+EGGVF+L L +PE+YP+  P+VRFLTKI+HPN+  K G ICLDILK+ WSPA  +++V  +I AL++ P PD PL+ +     +S +    ++
Subjt:  GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQS

Query:  MARMYTRLAA
         A+ +TRL A
Subjt:  MARMYTRLAA

AT1G16890.2 ubiquitin-conjugating enzyme 366.9e-2548.18Show/hide
Query:  GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQS
        GP+++P+EGGVF+L L +PE+YP+  P+VRFLTKI+HPN+  K G ICLDILK+ WSPA  +++V  +I AL++ P PD PL+ +     +S +    ++
Subjt:  GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQS

Query:  MARMYTRLAA
         A+ +TRL A
Subjt:  MARMYTRLAA

AT1G16890.3 ubiquitin-conjugating enzyme 366.9e-2548.18Show/hide
Query:  GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQS
        GP+++P+EGGVF+L L +PE+YP+  P+VRFLTKI+HPN+  K G ICLDILK+ WSPA  +++V  +I AL++ P PD PL+ +     +S +    ++
Subjt:  GPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQS

Query:  MARMYTRLAA
         A+ +TRL A
Subjt:  MARMYTRLAA

AT5G25760.1 peroxin41.9e-6293.16Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETP+EGGVFQLA SVPE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRG+
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
         SMA+MYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG

AT5G25760.2 peroxin41.9e-6293.16Show/hide
Query:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY
        ++GPSETP+EGGVFQLA SVPE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRG+
Subjt:  MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGY

Query:  QSMARMYTRLAAMPKKG
         SMA+MYTRLAAMPKKG
Subjt:  QSMARMYTRLAAMPKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGGACCATCAGAGACTCCTTTTGAAGGTGGTGTCTTCCAGCTTGCCTTATCCGTACCTGAGCAGTACCCTTTGCAACCTCCTCAAGTGCGGTTCTTAACGAAAAT
TTTCCATCCAAATGTTCATTTTAAGACGGGTGAGATCTGCCTAGACATATTGAAGAACGCGTGGAGCCCAGCATGGACTCTGCAATCTGTTTGTAGGGCTATAATCGCTT
TGATGGCTCATCCCGAACCTGATAGCCCGCTAAACTGTGATTCTGGAAATCTTCTGCGTTCGGGCGATGTCCGAGGTTATCAATCAATGGCAAGGATGTACACAAGGCTG
GCTGCCATGCCCAAAAAGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGGACCATCAGAGACTCCTTTTGAAGGTGGTGTCTTCCAGCTTGCCTTATCCGTACCTGAGCAGTACCCTTTGCAACCTCCTCAAGTGCGGTTCTTAACGAAAAT
TTTCCATCCAAATGTTCATTTTAAGACGGGTGAGATCTGCCTAGACATATTGAAGAACGCGTGGAGCCCAGCATGGACTCTGCAATCTGTTTGTAGGGCTATAATCGCTT
TGATGGCTCATCCCGAACCTGATAGCCCGCTAAACTGTGATTCTGGAAATCTTCTGCGTTCGGGCGATGTCCGAGGTTATCAATCAATGGCAAGGATGTACACAAGGCTG
GCTGCCATGCCCAAAAAGGGCTGA
Protein sequenceShow/hide protein sequence
MQGPSETPFEGGVFQLALSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRL
AAMPKKG