; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08309 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08309
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAminoacyl-tRNA hydrolase
Genome locationCarg_Chr05:3322812..3324090
RNA-Seq ExpressionCarg08309
SyntenyCarg08309
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598808.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-80100Show/hide
Query:  MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP
        MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP
Subjt:  MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP

Query:  LGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKA
        LGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKA
Subjt:  LGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKA

KAG7029746.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-94100Show/hide
Query:  MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP
        MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP
Subjt:  MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP

Query:  LGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRATT
        LGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRATT
Subjt:  LGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRATT

XP_022962062.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita moschata]9.2e-7992.31Show/hide
Query:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
        MISVISAS FTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSS SMSESA SNSAPPPDD VEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
Subjt:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA

Query:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        SVSA+WLNKDDPHT EYCSPHNIDSMHKVTLEVKGETQIVNLSEKL+A+SIAHKLWIEQPE+  +C AT
Subjt:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT

XP_022996792.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita maxima]4.6e-7892.9Show/hide
Query:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
        MISVISAS FTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESA SNSAPPPDD VEK ADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
Subjt:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA

Query:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        SVSAIWLNKDDP TSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLK +SIAHKLWIEQPE+  +C AT
Subjt:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]5.7e-8996.11Show/hide
Query:  MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP
        MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESA SNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP
Subjt:  MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWP

Query:  LGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        LGSVVTQGCHASVSA+WLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPE+  +C AT
Subjt:  LGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT

TrEMBL top hitse value%identityAlignment
A0A0A0LLQ2 Aminoacyl-tRNA hydrolase6.5e-6276.3Show/hide
Query:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDD----GVEKTADVLIQYVVLRRDLIDSWPLGSVVTQ
        M  VISAS FT SISKS  LCSC RSRV+PSSSLSL S  R ++ F SASMS+S  +NS   PDD      E  ADVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDD----GVEKTADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        GCHASVSAIWLNKDDPHTS+YC+PHNIDSMHKVTLEVKGETQ+VNLSEKLKA+SI HKLWIEQPE+  +C AT
Subjt:  GCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT

A0A6J1HBR1 Aminoacyl-tRNA hydrolase4.5e-7992.31Show/hide
Query:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
        MISVISAS FTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSS SMSESA SNSAPPPDD VEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
Subjt:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA

Query:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        SVSA+WLNKDDPHT EYCSPHNIDSMHKVTLEVKGETQIVNLSEKL+A+SIAHKLWIEQPE+  +C AT
Subjt:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT

A0A6J1K304 Aminoacyl-tRNA hydrolase2.2e-7892.9Show/hide
Query:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
        MISVISAS FTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESA SNSAPPPDD VEK ADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
Subjt:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA

Query:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        SVSAIWLNKDDP TSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLK +SIAHKLWIEQPE+  +C AT
Subjt:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase9.3e-6177.33Show/hide
Query:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDG---VEKTADVLIQYVVLRRDLIDSWPLGSVVTQG
        M SVISAS FTFSIS S +L  CS +RVW  SS+ L S N NS  FSSASMSESA SNS  P DDG    E+ ADVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDG---VEKTADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        CHASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKA+SI HKLW+EQPE+  +C A+
Subjt:  CHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT

A0A6J1KTS0 Aminoacyl-tRNA hydrolase9.3e-6177.33Show/hide
Query:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDG---VEKTADVLIQYVVLRRDLIDSWPLGSVVTQG
        M SVISAS FTFSIS S +L  CS +RVW  SS+ L S N NS  FSSASMSESA SNS  P DDG    E+ ADVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDG---VEKTADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        CHASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKA+SI HKLW+EQPE+  +C A+
Subjt:  CHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD11.2e-1744.34Show/hide
Query:  GVEKTADVLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEH
        GVE    +L+QY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPE+
Subjt:  GVEKTADVLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEH

Query:  PNSCRA
          +C A
Subjt:  PNSCRA

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD11.5e-1846.46Show/hide
Query:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRA
        +L+QY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPE+  +C A
Subjt:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRA

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD14.7e-1744.44Show/hide
Query:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRA
        VL+QY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPE+  +C A
Subjt:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRA

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein1.8e-4053.85Show/hide
Query:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA
        M + + ++ F F I          R R + S   ++R  +      +S SMS+  G   A       EK  DV++QYVVLRRDLIDSWPLGSVVTQGCHA
Subjt:  MISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCHA

Query:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT
        SV+AIW  KDDP T +YC P +IDSMHKVTLEVKGETQ++NLSEKLK   I+HKLW+EQPE+  +C AT
Subjt:  SVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCATGTGCTACCTTGTGTGAAGATATCATGATTTCTGTAATTTCAGCGTCTCCATTCACTTTCTCCATTTCCAAATCCACGAAGCTCTGTTCGTGTTCGAGGTC
TAGGGTTTGGCCCTCTTCTTCACTCAGTCTCCGCTCGCGTAACCGAAATTCGAATCTGTTTAGCTCCGCTTCTATGAGTGAATCCGCTGGAAGTAATTCCGCTCCTCCAC
CGGACGACGGCGTGGAGAAGACAGCCGATGTTTTGATTCAGTACGTGGTGCTCCGGAGAGATCTGATCGATTCGTGGCCTCTTGGAAGCGTCGTAACTCAGGGATGCCAT
GCTTCAGTGTCCGCTATTTGGTTGAACAAAGACGATCCTCACACTTCCGAGTACTGTAGTCCACACAATATCGATTCTATGCACAAGGTTACTCTTGAGGTGAAGGGAGA
AACTCAGATTGTCAACTTGTCGGAGAAACTAAAAGCAAGTTCAATCGCCCACAAACTATGGATAGAACAACCAGAGCATCCCAATTCTTGTCGTGCAACAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCATGTGCTACCTTGTGTGAAGATATCATGATTTCTGTAATTTCAGCGTCTCCATTCACTTTCTCCATTTCCAAATCCACGAAGCTCTGTTCGTGTTCGAGGTC
TAGGGTTTGGCCCTCTTCTTCACTCAGTCTCCGCTCGCGTAACCGAAATTCGAATCTGTTTAGCTCCGCTTCTATGAGTGAATCCGCTGGAAGTAATTCCGCTCCTCCAC
CGGACGACGGCGTGGAGAAGACAGCCGATGTTTTGATTCAGTACGTGGTGCTCCGGAGAGATCTGATCGATTCGTGGCCTCTTGGAAGCGTCGTAACTCAGGGATGCCAT
GCTTCAGTGTCCGCTATTTGGTTGAACAAAGACGATCCTCACACTTCCGAGTACTGTAGTCCACACAATATCGATTCTATGCACAAGGTTACTCTTGAGGTGAAGGGAGA
AACTCAGATTGTCAACTTGTCGGAGAAACTAAAAGCAAGTTCAATCGCCCACAAACTATGGATAGAACAACCAGAGCATCCCAATTCTTGTCGTGCAACAACTTAA
Protein sequenceShow/hide protein sequence
MVSCATLCEDIMISVISASPFTFSISKSTKLCSCSRSRVWPSSSLSLRSRNRNSNLFSSASMSESAGSNSAPPPDDGVEKTADVLIQYVVLRRDLIDSWPLGSVVTQGCH
ASVSAIWLNKDDPHTSEYCSPHNIDSMHKVTLEVKGETQIVNLSEKLKASSIAHKLWIEQPEHPNSCRATT