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Carg08311 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08311
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMethionyl-tRNA synthetase
Genome locationCarg_Chr05:3324469..3324882
RNA-Seq ExpressionCarg08311
SyntenyCarg08311
Gene Ontology termsGO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029748.1 hypothetical protein SDJN02_08090, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-72100Show/hide
Query:  MHAVLHHNRPNPKETSNSLKLPSLSIKSSKSTTLPTRFITQNPKKKSGSKQTITERSLEAKEKQEPEGGDKMCLVFVCDEDQRVLSRQPAPGACPFCGGM
        MHAVLHHNRPNPKETSNSLKLPSLSIKSSKSTTLPTRFITQNPKKKSGSKQTITERSLEAKEKQEPEGGDKMCLVFVCDEDQRVLSRQPAPGACPFCGGM
Subjt:  MHAVLHHNRPNPKETSNSLKLPSLSIKSSKSTTLPTRFITQNPKKKSGSKQTITERSLEAKEKQEPEGGDKMCLVFVCDEDQRVLSRQPAPGACPFCGGM

Query:  IQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        IQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
Subjt:  IQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

XP_004138769.1 uncharacterized protein LOC101206986 [Cucumis sativus]8.3e-3295.45Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDEDQRVLSRQPAPG CPFCGGMIQATDVESQWRFCF+PLYWKTKRKFYCTMCTRQLV+Q
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

XP_008445081.1 PREDICTED: uncharacterized protein LOC103488227 [Cucumis melo]2.9e-3296.97Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCF+PLYWKTKRKFYCTMCTRQLV+Q
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

XP_022962063.1 uncharacterized protein LOC111462635 [Cucurbita moschata]5.8e-33100Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

XP_038884125.1 uncharacterized protein LOC120075047 [Benincasa hispida]1.3e-3298.48Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLV+Q
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

TrEMBL top hitse value%identityAlignment
A0A1S3BCK8 uncharacterized protein LOC1034882271.4e-3296.97Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCF+PLYWKTKRKFYCTMCTRQLV+Q
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

A0A6J1BVT7 uncharacterized protein LOC1110051735.5e-2983.33Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDE+QRVLSRQPAPGACPFCGGM+QATD+++QW FCFLPLYWKTKRK YC++CTR+LV+Q
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

A0A6J1HDM3 uncharacterized protein LOC1114626352.8e-33100Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

A0A6J1KC13 uncharacterized protein LOC1114919252.8e-33100Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

A0A6P3Z2S4 uncharacterized protein LOC1074058424.9e-3086.36Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ
        MCLVFVCDED+RV+SRQPAPGACP+CGGM+QA DVESQWRFCFLPLYWKTKRKFYC++CTR+LV+Q
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein1.6e-0935.59Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMC
        +C  F+ D+ ++V   +PA G C  CG      D+++  RFCF+P+YW++ R   C+ C
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMC

AT4G29905.1 unknown protein1.2e-1753.85Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVI
        MCL  V  E++  L RQ APG CP+CGG + A D+E++W FCFLPL +K KRK+ C+ C R LV+
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVI

AT5G10695.1 unknown protein6.4e-2260Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVI
        MCLVFVCD+D+RV+ R  APGACP+CGG +Q  DV SQWRFCF+PL  K+KR+  C+ C ++L++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVI

AT5G10695.2 unknown protein1.4e-0535.38Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVI
        MCLVFVCD+D+RV+                         RFCF+PL  K+KR+  C+ C ++L++
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVI

AT5G57123.1 unknown protein7.8e-2056.92Show/hide
Query:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVI
        MCLV +CDE++  L RQ APG+CP+CGG +Q  DVE +W FCF+PL +K KRK+ C+ C R+LV+
Subjt:  MCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQWRFCFLPLYWKTKRKFYCTMCTRQLVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGCGGTTCTCCACCATAACAGGCCAAACCCCAAGGAAACCTCAAATTCCCTGAAACTTCCTTCTCTCTCTATAAAGTCTTCCAAGTCCACCACCTTACCAACCAG
ATTTATCACCCAAAACCCAAAAAAGAAATCAGGAAGCAAACAAACAATAACAGAAAGAAGCTTAGAAGCCAAAGAAAAGCAAGAACCTGAAGGAGGTGACAAGATGTGTT
TGGTGTTCGTGTGCGATGAGGATCAGAGGGTGCTGTCCAGGCAACCAGCTCCAGGCGCTTGCCCCTTCTGCGGAGGCATGATCCAGGCCACCGACGTTGAAAGCCAATGG
AGGTTCTGCTTCCTCCCCCTTTACTGGAAAACCAAACGCAAGTTCTATTGCACCATGTGCACCAGACAACTCGTTATACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACGCGGTTCTCCACCATAACAGGCCAAACCCCAAGGAAACCTCAAATTCCCTGAAACTTCCTTCTCTCTCTATAAAGTCTTCCAAGTCCACCACCTTACCAACCAG
ATTTATCACCCAAAACCCAAAAAAGAAATCAGGAAGCAAACAAACAATAACAGAAAGAAGCTTAGAAGCCAAAGAAAAGCAAGAACCTGAAGGAGGTGACAAGATGTGTT
TGGTGTTCGTGTGCGATGAGGATCAGAGGGTGCTGTCCAGGCAACCAGCTCCAGGCGCTTGCCCCTTCTGCGGAGGCATGATCCAGGCCACCGACGTTGAAAGCCAATGG
AGGTTCTGCTTCCTCCCCCTTTACTGGAAAACCAAACGCAAGTTCTATTGCACCATGTGCACCAGACAACTCGTTATACAGTAG
Protein sequenceShow/hide protein sequence
MHAVLHHNRPNPKETSNSLKLPSLSIKSSKSTTLPTRFITQNPKKKSGSKQTITERSLEAKEKQEPEGGDKMCLVFVCDEDQRVLSRQPAPGACPFCGGMIQATDVESQW
RFCFLPLYWKTKRKFYCTMCTRQLVIQ