; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08319 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08319
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionflowering-promoting factor 1-like
Genome locationCarg_Chr05:3374629..3374961
RNA-Seq ExpressionCarg08319
SyntenyCarg08319
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132061.1 flowering-promoting factor 1-like [Momordica charantia]1.7e-5190Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNG+IRLIENPQADS+GRLGNSRRKVLI+LPTGQ VSSYS L EILT+LGWERYYGGDP+LFQFHKRSSIDLISLP+D+AKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRD+
Subjt:  NPNLFHVRDV

XP_022950996.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]1.1e-5394.55Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGVIRLIENPQADS+GRLGNSRRKVLIYLPTGQAVSSYS L EILTSLGWERYYGGDPELFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

XP_022961815.1 flowering-promoting factor 1-like [Cucurbita moschata]7.9e-57100Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

XP_022997475.1 flowering-promoting factor 1-like [Cucurbita maxima]6.7e-5699.09Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLL EILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

XP_023546289.1 flowering-promoting factor 1-like [Cucurbita pepo subsp. pepo]2.5e-5598.18Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGVIRLIENPQADS+GRLGNSRRKVLIYLPTGQAVSSYSLL EILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

TrEMBL top hitse value%identityAlignment
A0A6J1BR67 flowering-promoting factor 1-like8.2e-5290Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNG+IRLIENPQADS+GRLGNSRRKVLI+LPTGQ VSSYS L EILT+LGWERYYGGDP+LFQFHKRSSIDLISLP+D+AKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRD+
Subjt:  NPNLFHVRDV

A0A6J1GGC5 flowering-promoting factor 1-like protein 25.1e-5494.55Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGVIRLIENPQADS+GRLGNSRRKVLIYLPTGQAVSSYS L EILTSLGWERYYGGDPELFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

A0A6J1HDA8 flowering-promoting factor 1-like3.8e-57100Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

A0A6J1K9R7 flowering-promoting factor 1-like3.2e-5699.09Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLL EILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

A0A6J1KTX8 flowering-promoting factor 1-like protein 25.1e-5494.55Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGVIRLIENPQADS+GRLGNSRRKVLIYLPTGQAVSSYS L EILTSLGWERYYGGDPELFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 13.7e-4172.73Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI
        MSGVWVFKNGVIRL+ENP  + +G    +RRKV++YLPTG+ VSSYS L +IL SLGWERY+ GGD +L QFHKRSSIDLISLP+D+ KFNSV+MYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

O24340 Flowering-promoting factor 19.7e-4273.64Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI
        MSGVWVFKNGVIRL+ENP  + +G   NSRRKV++YLPTG+ +SSYS L +IL SLGWERY+ GGD +L QFHKRSSIDLISLPKD+ KF+SV+MYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 13.6e-3660.48Show/hide
Query:  MSGVWVF-KNGVIRLIENPQADSNGRLGNS-----------RRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGD--PELFQFHKRSSIDLISLPKDY
        MSGVWVF KNGV+RL+ENP   S G    S           RRK+L++LP+ + VSSY  L +IL +LGWERYY GD    L QFHKR+SIDLISLP+D+
Subjt:  MSGVWVF-KNGVIRLIENPQADSNGRLGNS-----------RRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGD--PELFQFHKRSSIDLISLPKDY

Query:  AKFNSVHMYDIVIKNPNLFHVRDV
        +KFNS+HMYDIV+KNPN+FHVRD+
Subjt:  AKFNSVHMYDIVIKNPNLFHVRDV

Q9LGE3 Flowering-promoting factor 1-like protein 15.7e-3462.39Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK
        MSGVWVFKNGV+RL+E  QA +   +   RRK L++ P+GQ VSSY+ L   LT+LGWERYY  DP LFQFHKR S+DLISLP D++ F+SVHMYDIV+K
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIK

Query:  NPNLFHVRD
        N + F V D
Subjt:  NPNLFHVRD

Q9LXB5 Flowering-promoting factor 1-like protein 26.3e-4170.91Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI
        MSGVWVF NGVIRL+ENP Q+       + RR VL+YLPTG+AVSSYS L +IL SLGWERY+ GD +L Q+HKRSSIDLISLP+D++KFNSV+MYDIV+
Subjt:  MSGVWVFKNGVIRLIENP-QADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 12.5e-3760.48Show/hide
Query:  MSGVWVF-KNGVIRLIENPQADSNGRLGNS-----------RRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGD--PELFQFHKRSSIDLISLPKDY
        MSGVWVF KNGV+RL+ENP   S G    S           RRK+L++LP+ + VSSY  L +IL +LGWERYY GD    L QFHKR+SIDLISLP+D+
Subjt:  MSGVWVF-KNGVIRLIENPQADSNGRLGNS-----------RRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGD--PELFQFHKRSSIDLISLPKDY

Query:  AKFNSVHMYDIVIKNPNLFHVRDV
        +KFNS+HMYDIV+KNPN+FHVRD+
Subjt:  AKFNSVHMYDIVIKNPNLFHVRDV

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)4.5e-4270.91Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI
        MSGVWVF NGVIRL+ENP Q+       + RR VL+YLPTG+AVSSYS L +IL SLGWERY+ GD +L Q+HKRSSIDLISLP+D++KFNSV+MYDIV+
Subjt:  MSGVWVFKNGVIRLIENP-QADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

AT5G24860.1 flowering promoting factor 12.6e-4272.73Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI
        MSGVWVFKNGVIRL+ENP  + +G    +RRKV++YLPTG+ VSSYS L +IL SLGWERY+ GGD +L QFHKRSSIDLISLP+D+ KFNSV+MYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGGGTTTGGGTTTTCAAGAACGGTGTAATTCGGCTGATCGAAAATCCTCAAGCTGATTCCAATGGAAGGCTTGGGAACTCGAGGCGTAAGGTACTGATATACTT
GCCGACAGGCCAGGCCGTGTCGTCCTACTCCTTGCTACACGAAATCCTCACATCGCTGGGATGGGAGAGGTACTATGGAGGTGATCCCGAGCTGTTTCAGTTTCATAAAC
GCTCGTCTATCGACCTTATTTCTCTCCCCAAAGACTATGCCAAGTTTAACTCCGTTCATATGTACGACATAGTCATTAAAAACCCTAATCTCTTCCACGTTCGAGATGTT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGGGTTTGGGTTTTCAAGAACGGTGTAATTCGGCTGATCGAAAATCCTCAAGCTGATTCCAATGGAAGGCTTGGGAACTCGAGGCGTAAGGTACTGATATACTT
GCCGACAGGCCAGGCCGTGTCGTCCTACTCCTTGCTACACGAAATCCTCACATCGCTGGGATGGGAGAGGTACTATGGAGGTGATCCCGAGCTGTTTCAGTTTCATAAAC
GCTCGTCTATCGACCTTATTTCTCTCCCCAAAGACTATGCCAAGTTTAACTCCGTTCATATGTACGACATAGTCATTAAAAACCCTAATCTCTTCCACGTTCGAGATGTT
TGA
Protein sequenceShow/hide protein sequence
MSGVWVFKNGVIRLIENPQADSNGRLGNSRRKVLIYLPTGQAVSSYSLLHEILTSLGWERYYGGDPELFQFHKRSSIDLISLPKDYAKFNSVHMYDIVIKNPNLFHVRDV