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Carg08325 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08325
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:3417079..3417609
RNA-Seq ExpressionCarg08325
SyntenyCarg08325
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598820.1 Ubiquitin carboxyl-terminal hydrolase 26, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5097Show/hide
Query:  HFQNTFVREGSHEMECGIHCFRIHWTMLPTIERKITLQNVYGNDAHYSVQVSLSSARFQEDHCFVVVLVPPTGPPDMDEDFLSGVLQLQEIEIMFMNAIM
        HF NTFVREGSHEMECGIHCFRIHWTMLPTIERKITLQNVYGNDAHYSVQVSLSSARFQEDHCFVVVLVPPTGPPDMDEDFLSGVLQL+EIEIMFMNAI+
Subjt:  HFQNTFVREGSHEMECGIHCFRIHWTMLPTIERKITLQNVYGNDAHYSVQVSLSSARFQEDHCFVVVLVPPTGPPDMDEDFLSGVLQLQEIEIMFMNAIM
KAG7029762.1 hypothetical protein SDJN02_08104, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-71100Show/hide
Query:  MKFSQNIPYGAKLVVLFILQTAYVFTFLRSLCYHFQNTFVREGSHEMECGIHCFRIHWTMLPTIERKITLQNVYGNDAHYSVQVSLSSARFQEDHCFVVV
        MKFSQNIPYGAKLVVLFILQTAYVFTFLRSLCYHFQNTFVREGSHEMECGIHCFRIHWTMLPTIERKITLQNVYGNDAHYSVQVSLSSARFQEDHCFVVV
Subjt:  MKFSQNIPYGAKLVVLFILQTAYVFTFLRSLCYHFQNTFVREGSHEMECGIHCFRIHWTMLPTIERKITLQNVYGNDAHYSVQVSLSSARFQEDHCFVVV

Query:  LVPPTGPPDMDEDFLSGVLQLQEIEIMFMNAIM
        LVPPTGPPDMDEDFLSGVLQLQEIEIMFMNAIM
Subjt:  LVPPTGPPDMDEDFLSGVLQLQEIEIMFMNAIM
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCTCTCAAAACATCCCTTATGGAGCCAAGTTAGTTGTGTTGTTCATATTGCAAACTGCTTATGTATTTACCTTCTTAAGGTCTCTCTGCTATCATTTTCAGAA
CACTTTTGTCAGGGAAGGAAGCCATGAAATGGAGTGTGGGATACACTGCTTTCGGATTCACTGGACGATGCTACCGACGATCGAACGGAAAATTACGCTACAGAATGTTT
ACGGTAATGATGCACATTACAGTGTCCAAGTCTCTCTTTCTTCTGCTAGATTTCAGGAGGACCATTGCTTTGTAGTTGTTCTCGTCCCACCGACTGGACCTCCCGACATG
GACGAAGATTTTCTATCAGGTGTGCTTCAACTTCAAGAGATTGAAATTATGTTTATGAATGCGATAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCTCTCAAAACATCCCTTATGGAGCCAAGTTAGTTGTGTTGTTCATATTGCAAACTGCTTATGTATTTACCTTCTTAAGGTCTCTCTGCTATCATTTTCAGAA
CACTTTTGTCAGGGAAGGAAGCCATGAAATGGAGTGTGGGATACACTGCTTTCGGATTCACTGGACGATGCTACCGACGATCGAACGGAAAATTACGCTACAGAATGTTT
ACGGTAATGATGCACATTACAGTGTCCAAGTCTCTCTTTCTTCTGCTAGATTTCAGGAGGACCATTGCTTTGTAGTTGTTCTCGTCCCACCGACTGGACCTCCCGACATG
GACGAAGATTTTCTATCAGGTGTGCTTCAACTTCAAGAGATTGAAATTATGTTTATGAATGCGATAATGTGA
Protein sequenceShow/hide protein sequence
MKFSQNIPYGAKLVVLFILQTAYVFTFLRSLCYHFQNTFVREGSHEMECGIHCFRIHWTMLPTIERKITLQNVYGNDAHYSVQVSLSSARFQEDHCFVVVLVPPTGPPDM
DEDFLSGVLQLQEIEIMFMNAIM