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Carg08353 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08353
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE3 ubiquitin-protein ligase XBAT32-like
Genome locationCarg_Chr05:3606771..3607293
RNA-Seq ExpressionCarg08353
SyntenyCarg08353
Gene Ontology termsGO:0006464 - cellular protein modification process (biological process)
GO:0005515 - protein binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0140096 - catalytic activity, acting on a protein (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR020683 - Ankyrin repeat-containing domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598844.1 E3 ubiquitin-protein ligase XBAT32, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3798.7Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF
        +TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF

KAG7029788.1 putative E3 ubiquitin-protein ligase XBOS32, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-62100Show/hide
Query:  MRTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDFRYRHSNLILVGYKFLYSTSSKS
        MRTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDFRYRHSNLILVGYKFLYSTSSKS
Subjt:  MRTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDFRYRHSNLILVGYKFLYSTSSKS

Query:  LIHFLHLIHQCSQGGG
        LIHFLHLIHQCSQGGG
Subjt:  LIHFLHLIHQCSQGGG

XP_022997410.1 E3 ubiquitin-protein ligase XBAT32-like [Cucurbita maxima]3.3e-3797.4Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF
        +TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEP SKFDF
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF

XP_023522258.1 E3 ubiquitin-protein ligase XBAT32-like [Cucurbita pepo subsp. pepo]3.3e-3797.4Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF
        +TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEP SKFDF
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF

XP_023547016.1 E3 ubiquitin-protein ligase XBAT32-like [Cucurbita pepo subsp. pepo]3.3e-3797.4Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF
        +TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEP SKFDF
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF

TrEMBL top hitse value%identityAlignment
A0A0A0LK58 Uncharacterized protein1.2e-3284.34Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW------TNNEEPASKFDF
        +TALMQACQHGHWEVVQTLILF ANIHR+DYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW      +NNEE  SKF+F
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW------TNNEEPASKFDF

A0A1S3BTJ5 probable E3 ubiquitin-protein ligase XBOS322.0e-3283.13Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW------TNNEEPASKFDF
        +TALMQACQHGHWEVVQTL+LF ANIHR+DYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW      +NN EP SKF+F
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW------TNNEEPASKFDF

A0A5A7U2Y7 Putative E3 ubiquitin-protein ligase XBOS322.0e-3283.13Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW------TNNEEPASKFDF
        +TALMQACQHGHWEVVQTL+LF ANIHR+DYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW      +NN EP SKF+F
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFW------TNNEEPASKFDF

A0A6J1EPN8 E3 ubiquitin-protein ligase XBAT32-like4.6e-3797.4Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF
        +TALMQACQHGHWEVVQTLIL NANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF

A0A6J1K9I9 E3 ubiquitin-protein ligase XBAT32-like1.6e-3797.4Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF
        +TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEP SKFDF
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDF

SwissProt top hitse value%identityAlignment
Q337A0 Probable E3 ubiquitin-protein ligase XBOS335.5e-1967.74Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTP
        +TALM AC+HGHWEVVQ L+LF  N+ R+DYL+G TALH AA +G  RC+RLLLAD+VPS P
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTP

Q4FE45 E3 ubiquitin-protein ligase XBAT332.2e-2071.67Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPS
        +TALMQAC++GHWEVVQTL+LF  N+ R+DYL G TALH AA+NGH+RCIRL+LAD++PS
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPS

Q6KAE5 Probable E3 ubiquitin-protein ligase XBOS321.7e-2871.62Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASK
        +TALMQACQ+GHWEVVQTL+LFNAN+HR+DYLNGG+ALH AAL+GH+RC+RL+LADYVPS P FW + ++  S+
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASK

Q6NLQ8 E3 ubiquitin-protein ligase XBAT321.9e-2767.86Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWT---NNEEPASKFDFRYRH
        +TALMQACQHGHWEVV  LILF ANIHRSDYLNGGTALHLAALNGH RCIR+LL++Y+PS P  W+   N +   + FD    H
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWT---NNEEPASKFDFRYRH

Q7EZ44 Probable E3 ubiquitin-protein ligase XBOS352.4e-2266.67Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWT
        +TALMQAC +GHW+VVQ L+LF ANIH+ D  +G TA+H AAL GH+RC+RLL+ADYVPS P+FW+
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWT

Arabidopsis top hitse value%identityAlignment
AT1G07710.1 Ankyrin repeat family protein1.3e-0444.44Show/hide
Query:  TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLA
        TAL  A   GH EVV  L+   +++      NG TALH A+ NGH + I+ LLA
Subjt:  TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLA

AT3G09550.1 Ankyrin repeat family protein6.6e-0441.51Show/hide
Query:  TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLL
        T L+ A   GH EVV  L+  ++++      NG  ALHLAA  GH   +R LL
Subjt:  TALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLL

AT5G07270.1 XB3 ortholog 3 in Arabidopsis thaliana1.6e-2171.67Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPS
        +TALMQAC++GHWEVVQTL+LF  N+ R+DYL G TALH AA+NGH+RCIRL+LAD++PS
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPS

AT5G57740.1 XB3 ortholog 2 in Arabidopsis thaliana1.3e-2867.86Show/hide
Query:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWT---NNEEPASKFDFRYRH
        +TALMQACQHGHWEVV  LILF ANIHRSDYLNGGTALHLAALNGH RCIR+LL++Y+PS P  W+   N +   + FD    H
Subjt:  RTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWT---NNEEPASKFDFRYRH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACTGCCTTGATGCAAGCTTGTCAGCACGGTCACTGGGAGGTTGTTCAGACCCTTATACTTTTTAATGCCAATATTCACAGATCGGATTATTTGAACGGAGGTAC
TGCTCTTCACTTGGCTGCTCTGAATGGTCATTCTCGGTGCATCCGACTTCTGCTTGCTGATTATGTACCCAGTACACCGAAATTTTGGACTAACAATGAAGAACCAGCTT
CTAAGTTTGATTTTAGGTATCGTCATTCGAATCTAATCCTAGTCGGTTATAAGTTTCTCTATTCTACTTCGTCTAAGTCATTGATTCATTTCCTGCATCTCATCCATCAG
TGTTCTCAAGGAGGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGACTGCCTTGATGCAAGCTTGTCAGCACGGTCACTGGGAGGTTGTTCAGACCCTTATACTTTTTAATGCCAATATTCACAGATCGGATTATTTGAACGGAGGTAC
TGCTCTTCACTTGGCTGCTCTGAATGGTCATTCTCGGTGCATCCGACTTCTGCTTGCTGATTATGTACCCAGTACACCGAAATTTTGGACTAACAATGAAGAACCAGCTT
CTAAGTTTGATTTTAGGTATCGTCATTCGAATCTAATCCTAGTCGGTTATAAGTTTCTCTATTCTACTTCGTCTAAGTCATTGATTCATTTCCTGCATCTCATCCATCAG
TGTTCTCAAGGAGGTGGTTAA
Protein sequenceShow/hide protein sequence
MRTALMQACQHGHWEVVQTLILFNANIHRSDYLNGGTALHLAALNGHSRCIRLLLADYVPSTPKFWTNNEEPASKFDFRYRHSNLILVGYKFLYSTSSKSLIHFLHLIHQ
CSQGGG