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Carg08380 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08380
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionadagio protein 1-like
Genome locationCarg_Chr05:3813007..3822375
RNA-Seq ExpressionCarg08380
SyntenyCarg08380
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
GO:0009908 - flower development (biological process)
GO:0010114 - response to red light (biological process)
GO:0010498 - proteasomal protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0043153 - entrainment of circadian clock by photoperiod (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0009882 - blue light photoreceptor activity (molecular function)
InterPro domainsIPR035965 - PAS domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598872.1 Adagio protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3496.05Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

KAG7029814.1 Adagio protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-61100Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSCNVEVHLQKEGTHWLTPQWFQKSED
        MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSCNVEVHLQKEGTHWLTPQWFQKSED
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSCNVEVHLQKEGTHWLTPQWFQKSED

Query:  VWRMALNFKANC
        VWRMALNFKANC
Subjt:  VWRMALNFKANC

XP_008451638.1 PREDICTED: LOW QUALITY PROTEIN: adagio protein 1 [Cucumis melo]1.2e-3393.42Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMV+GYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

XP_022929649.1 adagio protein 1-like [Cucurbita moschata]1.9e-3496.05Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

XP_022997395.1 adagio protein 1-like [Cucurbita maxima]1.9e-3496.05Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

TrEMBL top hitse value%identityAlignment
A0A0A0LME5 Uncharacterized protein6.0e-3493.42Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMV+GYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

A0A5A7UKB2 Adagio protein 16.0e-3493.42Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMV+GYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

A0A5D3BQS7 Adagio protein 16.0e-3493.42Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMV+GYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

A0A6J1EPD7 adagio protein 1-like9.3e-3596.05Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

A0A6J1K9H3 adagio protein 1-like9.3e-3596.05Show/hide
Query:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

SwissProt top hitse value%identityAlignment
Q5Z8K3 Adagio-like protein 11.6e-1246.32Show/hide
Query:  MEWDSNSDLSG-----------DEEDEGFL-------LNDGGPLPFPVENLFQ-TAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDS SD +G           +EE+EG            GG   F +E + + + PCG VVTD+LEPD PIIYVN  FE  +GYRAEEVL  +C
Subjt:  MEWDSNSDLSG-----------DEEDEGFL-------LNDGGPLPFPVENLFQ-TAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

Q67UX0 Putative adagio-like protein 26.2e-1245.16Show/hide
Query:  MEWDSNSDLSGDEEDE-----------------GFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDS+S+ SGDEE+E                 G  +  GG     +E +     CG VV+D+LEPD PIIYVN  FE  +GYRAEEVL  +C
Subjt:  MEWDSNSDLSGDEEDE-----------------GFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

Q8W420 Adagio protein 21.0e-2265.38Show/hide
Query:  MEWDSNSDLSGDEE--DEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDS+SDLSG +E  ++G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNTVFE+V+GYRAEEV+  +C
Subjt:  MEWDSNSDLSGDEE--DEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

Q94BT6 Adagio protein 17.6e-2668.29Show/hide
Query:  MEWDSNSDLSGD------EEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDS SDLS D      +++EG L   GGP+P+PV NL  TAPCGFVVTD++EPD PIIYVNTVFEMV+GYRAEEVL G+C
Subjt:  MEWDSNSDLSGD------EEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

Q9C9W9 Adagio protein 31.2e-0755.81Show/hide
Query:  FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        +   P  F+V+D+LEPD P+IYVN VFE+ +GYRA+EVL  +C
Subjt:  FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

Arabidopsis top hitse value%identityAlignment
AT1G68050.1 flavin-binding, kelch repeat, f box 18.6e-0955.81Show/hide
Query:  FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        +   P  F+V+D+LEPD P+IYVN VFE+ +GYRA+EVL  +C
Subjt:  FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

AT2G18915.1 LOV KELCH protein 23.6e-2367.57Show/hide
Query:  MEWDSNSDLSGDEE--DEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVL
        MEWDS+SDLSG +E  ++G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNTVFE+V+GYRAEEV+
Subjt:  MEWDSNSDLSGDEE--DEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVL

AT2G18915.2 LOV KELCH protein 27.3e-2465.38Show/hide
Query:  MEWDSNSDLSGDEE--DEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDS+SDLSG +E  ++G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNTVFE+V+GYRAEEV+  +C
Subjt:  MEWDSNSDLSGDEE--DEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein5.4e-2768.29Show/hide
Query:  MEWDSNSDLSGD------EEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDS SDLS D      +++EG L   GGP+P+PV NL  TAPCGFVVTD++EPD PIIYVNTVFEMV+GYRAEEVL G+C
Subjt:  MEWDSNSDLSGD------EEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC

AT5G57360.2 Galactose oxidase/kelch repeat superfamily protein5.4e-2768.29Show/hide
Query:  MEWDSNSDLSGD------EEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC
        MEWDS SDLS D      +++EG L   GGP+P+PV NL  TAPCGFVVTD++EPD PIIYVNTVFEMV+GYRAEEVL G+C
Subjt:  MEWDSNSDLSGD------EEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAGGACGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTGGAGAACTTGTTCCAAACTGC
GCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCCGACCATCCCATCATCTATGTCAACACCGTCTTCGAAATGGTTTCTGGCTATCGGGCGGAGGAAGTGCTTGTCG
GTTCTTGCAATGTAGAGGTCCATTTGCAAAAAGAAGGCACCCACTGGTTGACTCCTCAGTGGTTTCAGAAATCAGAAGATGTCTGGAGGATGGCACTGAATTTCAAGGCG
AATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAGGACGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTGGAGAACTTGTTCCAAACTGC
GCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCCGACCATCCCATCATCTATGTCAACACCGTCTTCGAAATGGTTTCTGGCTATCGGGCGGAGGAAGTGCTTGTCG
GTTCTTGCAATGTAGAGGTCCATTTGCAAAAAGAAGGCACCCACTGGTTGACTCCTCAGTGGTTTCAGAAATCAGAAGATGTCTGGAGGATGGCACTGAATTTCAAGGCG
AATTGTTGA
Protein sequenceShow/hide protein sequence
MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSCNVEVHLQKEGTHWLTPQWFQKSEDVWRMALNFKA
NC