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Carg08385 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08385
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor bHLH146-like
Genome locationCarg_Chr05:3874884..3875222
RNA-Seq ExpressionCarg08385
SyntenyCarg08385
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598877.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4896.43Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
        MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIP   GGGGGGG NGGLEEEELLKQTESYIKCLELQV
Subjt:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV

Query:  NVLRCLVETNTI
        NVLRCLVETNTI
Subjt:  NVLRCLVETNTI

KAG7029819.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-52100Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
        MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
Subjt:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV

Query:  NVLRCLVETNTI
        NVLRCLVETNTI
Subjt:  NVLRCLVETNTI

XP_022929709.1 transcription factor bHLH146-like [Cucurbita moschata]3.6e-4997.32Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
        MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIP   GGGGGGGFNGGLEEEELLKQTESYIKCLELQV
Subjt:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV

Query:  NVLRCLVETNTI
        NVLRCLVETNTI
Subjt:  NVLRCLVETNTI

XP_022996791.1 transcription factor bHLH146-like [Cucurbita maxima]4.3e-5098.21Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
        MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLK+LRKIIP GGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
Subjt:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV

Query:  NVLRCLVETNTI
        NVLRCLVETNTI
Subjt:  NVLRCLVETNTI

XP_023545673.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]9.5e-5095.65Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGG---GGGGFNGGLEEEELLKQTESYIKCLE
        MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRE+LEREEEEEEKMENGLK+LRKIIPGGGGGG   GGGGFNGGLEEEELLKQTESYIKCLE
Subjt:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGG---GGGGFNGGLEEEELLKQTESYIKCLE

Query:  LQVNVLRCLVETNTI
        LQVNVLRCLVETNTI
Subjt:  LQVNVLRCLVETNTI

TrEMBL top hitse value%identityAlignment
A0A6J1DIU0 transcription factor bHLH1462.2e-2866.67Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKV------ANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIK
        MAMA SA++FAWG+ALK+KLLQ +        N FDFSLQTLKFSRE  E EEE+++KMENGL +LRKI+PGG       G    LEE++LLKQTESYIK
Subjt:  MAMAESATQFAWGNALKKKLLQTKV------ANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIK

Query:  CLELQVNVLRCLVETNT
        CLELQVNVLRCLV+TNT
Subjt:  CLELQVNVLRCLVETNT

A0A6J1EPJ9 transcription factor bHLH146-like1.7e-4997.32Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
        MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIP   GGGGGGGFNGGLEEEELLKQTESYIKCLELQV
Subjt:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV

Query:  NVLRCLVETNTI
        NVLRCLVETNTI
Subjt:  NVLRCLVETNTI

A0A6J1FJ33 transcription factor bHLH146-like2.4e-3065.57Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTK---VANGFDFSLQTLKFSRENLEREEE--------EEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQT
        MAMA+SAT+F+WGNALKKKLLQ +    +NGF  SLQ +KFSRENLERE+E        EE K+ENGL +LRKI+PGG         NG LEE++L KQT
Subjt:  MAMAESATQFAWGNALKKKLLQTK---VANGFDFSLQTLKFSRENLEREEE--------EEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQT

Query:  ESYIKCLELQVNVLRCLVETNT
        ESYIKCLELQVNVLRCLV+TNT
Subjt:  ESYIKCLELQVNVLRCLVETNT

A0A6J1I0E6 transcription factor bHLH146-like9.9e-2964Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTK---VANGFDFSLQTLKFSRENLEREEE-----------EEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELL
        MAMA+SAT+F+WGNALKKKLLQ +    +NGF FSL  +KFSRENLERE+E           EE K+ENGL +LRKI+PGG         NG LEE++L 
Subjt:  MAMAESATQFAWGNALKKKLLQTK---VANGFDFSLQTLKFSRENLEREEE-----------EEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELL

Query:  KQTESYIKCLELQVNVLRCLVETNT
        KQTESYIKCLELQVNVLRCLV+TNT
Subjt:  KQTESYIKCLELQVNVLRCLVETNT

A0A6J1K5R7 transcription factor bHLH146-like2.1e-5098.21Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
        MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLK+LRKIIP GGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV
Subjt:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQV

Query:  NVLRCLVETNTI
        NVLRCLVETNTI
Subjt:  NVLRCLVETNTI

SwissProt top hitse value%identityAlignment
Q9SKX1 Transcription factor IBH11.9e-0531.82Show/hide
Query:  MAMAESATQFAWGNALKKKLLQ--TKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLEL
        MA A   +   W  AL ++  +   K+     FS +  K S +   R  +    +E   +RLR ++PGG          GG+E  +L+++T  YIKCL +
Subjt:  MAMAESATQFAWGNALKKKLLQ--TKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLEL

Query:  QVNVLRCLVE
        QV V++CLV+
Subjt:  QVNVLRCLVE

Q9SUM5 Transcription factor bHLH1461.6e-0431.25Show/hide
Query:  MAMAESATQFAWGNALKKKL-LQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQ
        MA+A SA +FAW   L +KL   +        S   ++      +    EE  +E  L+ L+K++PGG            +  EE+L +  +YIKCLELQ
Subjt:  MAMAESATQFAWGNALKKKL-LQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQ

Query:  VNVLRCLVETNT
           L+ +V+ +T
Subjt:  VNVLRCLVETNT

Arabidopsis top hitse value%identityAlignment
AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors3.9e-0936Show/hide
Query:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLER--------------EEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELL
        MA A SA +FAW   L++KLL    ++ +D  + T     E LER              EEEE  +++  LK L+K++PGG            +  EE+L
Subjt:  MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLER--------------EEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELL

Query:  KQTESYIKCLELQVNVLRCLVETNT
         +  SYI CLELQ+ VL+ +V+ NT
Subjt:  KQTESYIKCLELQVNVLRCLVETNT

AT2G43060.1 ILI1 binding bHLH 11.4e-0631.82Show/hide
Query:  MAMAESATQFAWGNALKKKLLQ--TKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLEL
        MA A   +   W  AL ++  +   K+     FS +  K S +   R  +    +E   +RLR ++PGG          GG+E  +L+++T  YIKCL +
Subjt:  MAMAESATQFAWGNALKKKLLQ--TKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLEL

Query:  QVNVLRCLVE
        QV V++CLV+
Subjt:  QVNVLRCLVE

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators1.2e-0531.25Show/hide
Query:  MAMAESATQFAWGNALKKKL-LQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQ
        MA+A SA +FAW   L +KL   +        S   ++      +    EE  +E  L+ L+K++PGG            +  EE+L +  +YIKCLELQ
Subjt:  MAMAESATQFAWGNALKKKL-LQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQ

Query:  VNVLRCLVETNT
           L+ +V+ +T
Subjt:  VNVLRCLVETNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCTGAATCAGCTACTCAATTTGCGTGGGGCAATGCTCTAAAGAAGAAGCTTCTTCAAACAAAAGTTGCCAATGGTTTTGATTTCTCTCTCCAAACACTGAA
ATTTTCTCGAGAAAATTTAGAAAGAGAAGAAGAAGAGGAAGAGAAGATGGAAAATGGGTTGAAGAGGCTGAGGAAGATCATACCAGGTGGCGGCGGCGGCGGCGGTGGTG
GTGGTTTTAATGGAGGTTTGGAAGAGGAAGAATTGTTGAAACAAACTGAAAGTTACATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGAAACAAAC
ACAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCTGAATCAGCTACTCAATTTGCGTGGGGCAATGCTCTAAAGAAGAAGCTTCTTCAAACAAAAGTTGCCAATGGTTTTGATTTCTCTCTCCAAACACTGAA
ATTTTCTCGAGAAAATTTAGAAAGAGAAGAAGAAGAGGAAGAGAAGATGGAAAATGGGTTGAAGAGGCTGAGGAAGATCATACCAGGTGGCGGCGGCGGCGGCGGTGGTG
GTGGTTTTAATGGAGGTTTGGAAGAGGAAGAATTGTTGAAACAAACTGAAAGTTACATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGAAACAAAC
ACAATTTGA
Protein sequenceShow/hide protein sequence
MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGGGGFNGGLEEEELLKQTESYIKCLELQVNVLRCLVETN
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