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Carg08407 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08407
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:5892331..5892896
RNA-Seq ExpressionCarg08407
SyntenyCarg08407
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043464.1 hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa]1.2e-1046.67Show/hide
Query:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCC
        M T KL  VF+A+  L +C V  +E QGLW+CIRPC++   +  C +DC   ++GTG+CIPKR  +   E +CCC
Subjt:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCC
KAG6605731.1 hypothetical protein SDJN03_03048, partial [Cucurbita argyrosperma subsp. sororia]3.5e-39100Show/hide
Query:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCCDR
        MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCCDR
Subjt:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCCDR
KAG7035638.1 hypothetical protein SDJN02_02436, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-46100Show/hide
Query:  MRGLGSESTSIQMATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCCDR
        MRGLGSESTSIQMATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCCDR
Subjt:  MRGLGSESTSIQMATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCCDR
KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]2.3e-0635.14Show/hide
Query:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCC
        M T KLF V + V    SC  +S E   LW+C+ PC+ +  + +C   C+ +  G G C+PK  G    ++ CC
Subjt:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCC
TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein1.1e-0635.14Show/hide
Query:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCC
        M T KLF V + V    SC  +S E   LW+C+ PC+ +  + +C   C+ +  G G C+PK  G    ++ CC
Subjt:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCC
A0A5A7TJH1 Uncharacterized protein5.7e-1146.67Show/hide
Query:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCC
        M T KL  VF+A+  L +C V  +E QGLW+CIRPC++   +  C +DC   ++GTG+CIPKR  +   E +CCC
Subjt:  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGATTGGGTTCTGAAAGCACATCAATTCAAATGGCAACTCCAAAGCTTTTTGCAGTGTTCATCGCAGTCATGTTCTTGTGTTCTTGTTTGGTTGCATCAACTGA
AGTGCAAGGTTTGTGGAGCTGCATTCGTCCATGTGCCAAAGATGAACTGAATTATGTCTGTAAGTTGGATTGCCTCCATGAACATCGAGGCACTGGATCTTGTATACCTA
AACGAGATGGCACCGGTGGTGGTGAACTTTTATGTTGTTGTGATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGATTGGGTTCTGAAAGCACATCAATTCAAATGGCAACTCCAAAGCTTTTTGCAGTGTTCATCGCAGTCATGTTCTTGTGTTCTTGTTTGGTTGCATCAACTGA
AGTGCAAGGTTTGTGGAGCTGCATTCGTCCATGTGCCAAAGATGAACTGAATTATGTCTGTAAGTTGGATTGCCTCCATGAACATCGAGGCACTGGATCTTGTATACCTA
AACGAGATGGCACCGGTGGTGGTGAACTTTTATGTTGTTGTGATCGTTGATGCGCAAAAAAGAACGAGTTGTCTTGAATTGATGTTGCTGGAATAAAATGATAACGGGTT
ACGTTATCTTATTAATAATAATTGTCGAAATATCTTCTCATTTTTACTGAGATGTAAATTTGATAAAAATACTCTAATTATAAAGTGTTTTCCCTCGTTTCGTTTGTTAG
GGGAGGTTTCCACACCCTTATAAATAGTGTTTTGTTCT
Protein sequenceShow/hide protein sequence
MRGLGSESTSIQMATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCCDR