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Carg08411 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08411
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionheavy metal-associated isoprenylated plant protein 39-like
Genome locationCarg_Chr02:5879961..5880734
RNA-Seq ExpressionCarg08411
SyntenyCarg08411
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605726.1 Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5297.62Show/hide
Query:  MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII
        MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII
Subjt:  MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII

Query:  SVGPAKEEKKEEKKEEKKEEKKRRKR
        SVGPAKEEKKEEKKEEKKEEKK  K+
Subjt:  SVGPAKEEKKEEKKEEKKEEKKRRKR

KAG7035634.1 Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-57100Show/hide
Query:  MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII
        MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII
Subjt:  MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII

Query:  SVGPAKEEKKEEKKEEKKEEKKRRKRRKRRRSKNL
        SVGPAKEEKKEEKKEEKKEEKKRRKRRKRRRSKNL
Subjt:  SVGPAKEEKKEEKKEEKKEEKKRRKRRKRRRSKNL

XP_022957620.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata]2.8e-3296.77Show/hide
Query:  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKR
        MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKK  K+
Subjt:  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKR

XP_022996221.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita maxima]1.8e-5093.08Show/hide
Query:  MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII
        MACGCVTVLHKHNTITIP LLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSI ADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII
Subjt:  MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII

Query:  SVGPAKEEKKEEKKEEKKEEKKRRKRRKRR
        SVGPAKEEKKEEKKEEKKEEKK  K+ +++
Subjt:  SVGPAKEEKKEEKKEEKKEEKKRRKRRKRR

XP_023532946.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo]1.8e-4286.61Show/hide
Query:  MACGCVTVLHKHNTITI-PTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDI
        MACGCVTVLHKHNT T  P   S+ +    +LTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDI
Subjt:  MACGCVTVLHKHNTITI-PTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDI

Query:  ISVGPAKEEKKEEKKEEKKEEKKRRKR
        ISVGPAKEEKKEEKKEEKKEEKK  K+
Subjt:  ISVGPAKEEKKEEKKEEKKEEKKRRKR

TrEMBL top hitse value%identityAlignment
A0A061G0W6 Copper transport protein family3.4e-3181.58Show/hide
Query:  SLFYTAFPH--LTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKE
        SLF  AF    +TKMAQKVVLKV+TMTD K+KQKAIEAAADIYGVDSIAADLKDQKLTVVG MDAVA+VKKLKKVGKVDIISVGPAKEEKKEEKKEEKKE
Subjt:  SLFYTAFPH--LTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKE

Query:  EKKRRKRRKRRRSK
        EKK  K+ +++  K
Subjt:  EKKRRKRRKRRRSK

A0A6J1A686 heavy metal-associated isoprenylated plant protein 398.9e-3280.87Show/hide
Query:  LSLFYTAFP--HLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKK
        +SLF  +F    +TKMAQKVVLKV+TMTDDK+KQKAIEAAADIYGVDSIAADLKDQKLTVVG MDAVA+VKKLKKVGKVDIISVGPAKEEKKEEKKEEKK
Subjt:  LSLFYTAFP--HLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKK

Query:  EEKKRRKRRKRRRSK
        EEKK  K+ +++  K
Subjt:  EEKKRRKRRKRRRSK

A0A6J1E094 heavy metal-associated isoprenylated plant protein 392.6e-3189Show/hide
Query:  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKRRKRRRSK
        MAQKVVLKVMTMTDDK+KQKAIEAAADIYGVDSIAADLKDQKLTV+GSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKK  K+ +++  K
Subjt:  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKRRKRRRSK

A0A6J1H124 heavy metal-associated isoprenylated plant protein 39-like1.4e-3296.77Show/hide
Query:  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKR
        MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKK  K+
Subjt:  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKR

A0A6J1K441 heavy metal-associated isoprenylated plant protein 39-like8.5e-5193.08Show/hide
Query:  MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII
        MACGCVTVLHKHNTITIP LLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSI ADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII
Subjt:  MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDII

Query:  SVGPAKEEKKEEKKEEKKEEKKRRKRRKRR
        SVGPAKEEKKEEKKEEKKEEKK  K+ +++
Subjt:  SVGPAKEEKKEEKKEEKKEEKKRRKRRKRR

SwissProt top hitse value%identityAlignment
O03982 Heavy metal-associated isoprenylated plant protein 391.3e-1150.59Show/hide
Query:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKV-DIISVGPAKEEKKEEKKEEKKE
        +K+VLK + + DD++KQKA++  + + G+DSIA D+K++KLTV+G++D V +V KL+K   + DI+ VGPAKE +KE+K+E KKE
Subjt:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKV-DIISVGPAKEEKKEEKKEEKKE

Q9LTE3 Heavy metal-associated isoprenylated plant protein 122.1e-0647.13Show/hide
Query:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKK
        Q VVLK + +  +K+KQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+   + ISVGP KE +K++  + KK E K
Subjt:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKK

Arabidopsis top hitse value%identityAlignment
AT1G01490.1 Heavy metal transport/detoxification superfamily protein9.1e-1350.59Show/hide
Query:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKV-DIISVGPAKEEKKEEKKEEKKE
        +K+VLK + + DD++KQKA++  + + G+DSIA D+K++KLTV+G++D V +V KL+K   + DI+ VGPAKE +KE+K+E KKE
Subjt:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKV-DIISVGPAKEEKKEEKKEEKKE

AT1G01490.2 Heavy metal transport/detoxification superfamily protein9.1e-1350.59Show/hide
Query:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKV-DIISVGPAKEEKKEEKKEEKKE
        +K+VLK + + DD++KQKA++  + + G+DSIA D+K++KLTV+G++D V +V KL+K   + DI+ VGPAKE +KE+K+E KKE
Subjt:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKV-DIISVGPAKEEKKEEKKEEKKE

AT5G23760.1 Copper transport protein family2.3e-3282Show/hide
Query:  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKRRKRRRSK
        MAQKVVLKV+TMTDDK+KQKAIEAAADI+GVDSIAAD+KDQKLTV+G MDAVA+VKKLKKVGKVD+ISVGPAKEEKKEEKKEEKKEEKK  K+ +++  +
Subjt:  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKRRKRRRSK

AT5G52740.1 Copper transport protein family1.5e-0747.13Show/hide
Query:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKK
        Q VVLK + +  +K+KQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+   + ISVGP KE +K++  + KK E K
Subjt:  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGCGGATGCGTCACTGTTCTTCATAAACATAATACAATTACAATCCCCACCCTCCTTTCTCTGTTCTACACGGCTTTTCCTCATCTCACCAAAATGGCTCAGAA
AGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCTGACATCTACGGCGTTGATTCGATAGCCGCGGATCTGAAGGATC
AGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAG
GAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAAAAATCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGCGGATGCGTCACTGTTCTTCATAAACATAATACAATTACAATCCCCACCCTCCTTTCTCTGTTCTACACGGCTTTTCCTCATCTCACCAAAATGGCTCAGAA
AGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCTGACATCTACGGCGTTGATTCGATAGCCGCGGATCTGAAGGATC
AGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAG
GAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAAAAATCTGTAA
Protein sequenceShow/hide protein sequence
MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKK
EEKKEEKKEEKKRRKRRKRRRSKNL