; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08446 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08446
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein BOLA4, chloroplastic/mitochondrial
Genome locationCarg_Chr02:5654598..5658895
RNA-Seq ExpressionCarg08446
SyntenyCarg08446
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR002634 - BolA protein
IPR036065 - BolA-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605693.1 Protein BOLA4, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.1e-8296.59Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQF IVSQQFTT+CVRTAAVSAAITTTTAT V SKSSNVLKFSYVN R SNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
Subjt:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

KAG7035601.1 Protein BOLA4, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-88100Show/hide
Query:  MMIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSM
        MMIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSM
Subjt:  MMIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSM

Query:  ENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        ENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
Subjt:  ENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

XP_022958680.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita moschata]5.6e-8196.02Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQF IVSQQFTT+CVRTAAVSAAITTTTAT V SKSSNVLKFSYVN R SNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQ S
Subjt:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

XP_022996142.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita maxima]7.6e-8698.3Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTT+CVRTAAVSAAITTTTATGVCSKSSNVLKFSYVN RFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EAEAQNS
Subjt:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

XP_023534696.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]1.2e-8396.59Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIK PQVAFRRVLPL VHRNEQFF+VSQQFTT+CVRTAAVSAAITTTTATGV SKSSNVLKFSYVN RFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
Subjt:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

TrEMBL top hitse value%identityAlignment
A0A0A0KRR5 Uncharacterized protein2.9e-6780.23Show/hide
Query:  MMIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSM
        MMIKVPQVAFRRVLP+F+ RN  F +VS+Q T++CV T AV A I +T+ TG+ SKSSNV K+S  N  F  WGSSRN+ +RATQVN+SGSIDSPLMQSM
Subjt:  MMIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSM

Query:  ENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        ENKIKEQL+AQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA AQNS
Subjt:  ENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

A0A1S3CT29 protein BOLA4, chloroplastic/mitochondrial1.1e-6679.55Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQ+AFRRVLP+ + RN+ F +VS+Q T++CV TAAV A IT+ + TG+ SKSSNV+K+S  N  F  WGSSRN+ +RATQVN+SGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        NKIKEQL+AQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA AQNS
Subjt:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

A0A5A7UJH5 Protein BOLA42.5e-6679.55Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQ+AFRRVLP+ + RN+ F +VS+Q T++CV TAAV A IT+ + TG+ SKSSNV+K+S  N  F  WGSSRN  +RATQVN+SGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        NKIKEQL+AQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEA AQNS
Subjt:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

A0A6J1H464 protein BOLA4, chloroplastic/mitochondrial2.7e-8196.02Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQF IVSQQFTT+CVRTAAVSAAITTTTAT V SKSSNVLKFSYVN R SNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQ S
Subjt:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

A0A6J1K139 protein BOLA4, chloroplastic/mitochondrial3.7e-8698.3Show/hide
Query:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
        MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTT+CVRTAAVSAAITTTTATGVCSKSSNVLKFSYVN RFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME
Subjt:  MIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSME

Query:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS
        NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTP EAEAQNS
Subjt:  NKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS

SwissProt top hitse value%identityAlignment
Q682I1 Protein BOLA1, chloroplastic9.9e-0428.16Show/hide
Query:  NDSGSIDSPLMQSMENKIKEQLEAQSVSVKDA-------------YGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAE
        +DSG+I++   + M  K++++LE   + ++D                D  H ++ +VS  FEG   V R R+VY  + EEL + +HA+  + ++TP+E+ 
Subjt:  NDSGSIDSPLMQSMENKIKEQLEAQSVSVKDA-------------YGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAE

Query:  AQN
        +++
Subjt:  AQN

Q9LF68 Protein BOLA4, chloroplastic/mitochondrial2.9e-3262.2Show/hide
Query:  TGVCSKSSNVLKFSYVNR--RFSNWGS----SRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQR
        + V S+        Y NR  R S +G+    S N   +++Q+ND+GSID  LMQSME KIKEQL A+SV+V D  GDGRHV I+VVSSAFEGQ+AVNRQR
Subjt:  TGVCSKSSNVLKFSYVNR--RFSNWGS----SRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQR

Query:  MVYKAIWEELQSTVHAVDQMTTRTPAE
        MVYKAIWEELQ+ VHAVDQMTT+TP+E
Subjt:  MVYKAIWEELQSTVHAVDQMTTRTPAE

Arabidopsis top hitse value%identityAlignment
AT1G55805.1 BolA-like family protein7.0e-0528.16Show/hide
Query:  NDSGSIDSPLMQSMENKIKEQLEAQSVSVKDA-------------YGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAE
        +DSG+I++   + M  K++++LE   + ++D                D  H ++ +VS  FEG   V R R+VY  + EEL + +HA+  + ++TP+E+ 
Subjt:  NDSGSIDSPLMQSMENKIKEQLEAQSVSVKDA-------------YGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAE

Query:  AQN
        +++
Subjt:  AQN

AT4G26500.1 chloroplast sulfur E4.5e-0431.18Show/hide
Query:  GSIDSPLMQSMENKIKE-QLEAQSVS--------VKDAYGDG--RHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE
        GS    + + +E ++   +LE + VS        V+ + GD    H ++ +VS AF+G++ V R R++Y  + +EL+S +HA+  +  +TPAE
Subjt:  GSIDSPLMQSMENKIKE-QLEAQSVS--------VKDAYGDG--RHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAE

AT5G17560.1 BolA-like family protein2.1e-3362.2Show/hide
Query:  TGVCSKSSNVLKFSYVNR--RFSNWGS----SRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQR
        + V S+        Y NR  R S +G+    S N   +++Q+ND+GSID  LMQSME KIKEQL A+SV+V D  GDGRHV I+VVSSAFEGQ+AVNRQR
Subjt:  TGVCSKSSNVLKFSYVNR--RFSNWGS----SRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQR

Query:  MVYKAIWEELQSTVHAVDQMTTRTPAE
        MVYKAIWEELQ+ VHAVDQMTT+TP+E
Subjt:  MVYKAIWEELQSTVHAVDQMTTRTPAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTAAGGTTCCGCAAGTCGCGTTCCGTCGGGTTCTTCCACTATTTGTTCACCGAAATGAACAGTTTTTTATTGTTTCCCAACAATTCACGACCAGCTGTGTCCG
CACCGCCGCCGTTTCCGCTGCAATCACTACAACAACCGCCACTGGCGTCTGTAGTAAGAGTAGTAATGTTTTGAAATTTAGCTATGTTAATAGAAGATTCTCAAATTGGG
GTTCAAGTCGGAACATGTGTGTTAGAGCCACTCAAGTGAATGACTCTGGATCTATCGATTCCCCGCTTATGCAGTCAATGGAGAACAAGATTAAGGAACAATTAGAAGCA
CAATCTGTATCGGTAAAAGATGCATATGGAGATGGACGACATGTTAGCATTGATGTTGTTTCTTCTGCCTTTGAGGGACAAACGGCTGTTAATAGGCAGAGGATGGTGTA
CAAAGCTATTTGGGAGGAGCTACAGAGCACAGTCCATGCAGTGGATCAGATGACAACCAGAACACCCGCTGAAGCAGAAGCTCAGAACTCGTAA
mRNA sequenceShow/hide mRNA sequence
TAAAATAATTGGTAGAGTCGAGGGTAAATTTATAACTCAGCCTGGGTGTTAAGCGTGTGCAGACCGTACATCAAAGATCAACCAAGAACTCGGTAGAACAAACCAATCAA
GTAAGAGCAGTTCGATCGATTCAGCCGCGGCTAAGACTTCGACGATGATGATTAAGGTTCCGCAAGTCGCGTTCCGTCGGGTTCTTCCACTATTTGTTCACCGAAATGAA
CAGTTTTTTATTGTTTCCCAACAATTCACGACCAGCTGTGTCCGCACCGCCGCCGTTTCCGCTGCAATCACTACAACAACCGCCACTGGCGTCTGTAGTAAGAGTAGTAA
TGTTTTGAAATTTAGCTATGTTAATAGAAGATTCTCAAATTGGGGTTCAAGTCGGAACATGTGTGTTAGAGCCACTCAAGTGAATGACTCTGGATCTATCGATTCCCCGC
TTATGCAGTCAATGGAGAACAAGATTAAGGAACAATTAGAAGCACAATCTGTATCGGTAAAAGATGCATATGGAGATGGACGACATGTTAGCATTGATGTTGTTTCTTCT
GCCTTTGAGGGACAAACGGCTGTTAATAGGCAGAGGATGGTGTACAAAGCTATTTGGGAGGAGCTACAGAGCACAGTCCATGCAGTGGATCAGATGACAACCAGAACACC
CGCTGAAGCAGAAGCTCAGAACTCGTAACTCTAGAAGTTTGTCCAACCCTTATCTTTGCCAATAAATGTCTTACAATTAAAGTATGCACTTATTATTCCCTTTCAGCAAT
TGATTAATGGCACAAATCTTATGTTCGATCTTTCATTCAAGATTGGTGGTCAAGGAATCAACCTGTGTTTTTTTT
Protein sequenceShow/hide protein sequence
MMIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTSCVRTAAVSAAITTTTATGVCSKSSNVLKFSYVNRRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEA
QSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAEAQNS