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Carg08448 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08448
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationCarg_Chr02:5639356..5642864
RNA-Seq ExpressionCarg08448
SyntenyCarg08448
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143640.2 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus]4.5e-9098.1Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGI+KSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022958111.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata]2.4e-91100Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022996140.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita maxima]1.2e-9099.37Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIH IGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_023534747.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita pepo subsp. pepo]5.9e-9098.73Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGIVKSIKDKGIG+FWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TD TGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_038875755.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Benincasa hispida]2.9e-8996.84Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGI+KSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ++DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

TrEMBL top hitse value%identityAlignment
A0A0A0KNC9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.2e-9098.1Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGI+KSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A5A7ULJ6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.2e-8896.2Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGI+KSIKDKGIGTFWRELKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKYYQ++DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1ELZ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 127.1e-8996.84Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGI+KSIKDKG+GTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1H155 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.2e-91100Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1K5W7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 125.8e-9199.37Show/hide
Query:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
        MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIH IGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI
Subjt:  MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

SwissProt top hitse value%identityAlignment
O97725 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.0e-1137.39Show/hide
Query:  GYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH
        GYL+ L   N ++        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +TD                 H
Subjt:  GYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH

Query:  KENFSGEGEELIYHS
        K N SG  ++ + +S
Subjt:  KENFSGEGEELIYHS

Q0MQ85 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.5e-1141.49Show/hide
Query:  TLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS
        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH ITD       +         HK N +G  E+ + +S
Subjt:  TLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 126.1e-1344.87Show/hide
Query:  TLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSG
        TLVGVDK GN+YY+   E   YGRHRWVEY +    + + +PPE+H W+H+++D    E+L   P+ Y   H  N +G
Subjt:  TLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSG

Q9M9M9 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.0e-7276.28Show/hide
Query:  SVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD
        +V +  +++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKL  +TQYGRHRWVEYA K RYNASQVP EWHGWLH+ITD
Subjt:  SVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

Q9N2W7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 125.5e-1438.36Show/hide
Query:  IGTFWRELKEEGYLKCLPDGNLLQ--TKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHYITDHTGDELLMLK
        I  F + +KE G +K +     L   T++     TLVG D FGN+YY+  +      R+RWVE+ +K    Y+A+QVPPEWH WLH+IT    D+   +K
Subjt:  IGTFWRELKEEGYLKCLPDGNLLQ--TKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHYITDHTGDELLMLK

Query:  P---SRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQP
        P     + +EHKEN S      IY  K +   P     T+ Q WQP
Subjt:  P---SRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQP

Arabidopsis top hitse value%identityAlignment
AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit1.4e-7376.28Show/hide
Query:  SVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD
        +V +  +++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKL  +TQYGRHRWVEYA K RYNASQVP EWHGWLH+ITD
Subjt:  SVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS

AT3G03100.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit7.0e-7375.64Show/hide
Query:  SVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD
        +V +  +++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKL  +TQYG HRWVEYA K RYNASQVP EWHGWLH+ITD
Subjt:  SVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGGTGGTGCGGGGGATTGTGAAGTCGATCAAAGATAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAA
CCTATTGCAAACCAAAATTCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGCAATAAATATTACCAGAAGCTCGATGAAGAGACTCAATATGGAAGACACA
GGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACTACATAACTGATCACACAGGAGACGAGCTTCTGATG
CTGAAACCCAGCAGGTATGGAATAGAACATAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTTATTTACCATTCCAAAGGACATGCTCTTAATCCTGGACAGAGAGATTG
GACTCGATACCAGTCATGGCAACCAACCAAGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGGTGGTGCGGGGGATTGTGAAGTCGATCAAAGATAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAA
CCTATTGCAAACCAAAATTCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGCAATAAATATTACCAGAAGCTCGATGAAGAGACTCAATATGGAAGACACA
GGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACTACATAACTGATCACACAGGAGACGAGCTTCTGATG
CTGAAACCCAGCAGGTATGGAATAGAACATAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTTATTTACCATTCCAAAGGACATGCTCTTAATCCTGGACAGAGAGATTG
GACTCGATACCAGTCATGGCAACCAACCAAGTCCTAA
Protein sequenceShow/hide protein sequence
MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLM
LKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS