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Carg08451 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08451
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMADS-box protein AGL42-like
Genome locationCarg_Chr02:5619098..5621402
RNA-Seq ExpressionCarg08451
SyntenyCarg08451
Gene Ontology termsGO:0009838 - abscission (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010150 - leaf senescence (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0080187 - floral organ senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605687.1 MADS-box protein AGL42, partial [Cucurbita argyrosperma subsp. sororia]1.6e-40100Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

KAG7035596.1 MADS-box protein AGL42, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-89100Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQACGMHIHVYFCR
        MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQACGMHIHVYFCR
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQACGMHIHVYFCR

Query:  LVSAVLDLGRGGSRFNMNIVLGNFSLSHVSSNALKNEDNTKVLSTLLKLRCNGSFGQFFVDDYKFNP
        LVSAVLDLGRGGSRFNMNIVLGNFSLSHVSSNALKNEDNTKVLSTLLKLRCNGSFGQFFVDDYKFNP
Subjt:  LVSAVLDLGRGGSRFNMNIVLGNFSLSHVSSNALKNEDNTKVLSTLLKLRCNGSFGQFFVDDYKFNP

XP_022957636.1 MADS-box protein AGL42-like [Cucurbita moschata]4.6e-4098.86Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCD EVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

XP_022995310.1 MADS-box protein AGL42-like [Cucurbita maxima]7.3e-3895.45Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRG+VEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCD EVSVMIFSQKGRLYEFSSTDIHKSI+RYR YGKDGQTNALRSEVYMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

XP_023532454.1 MADS-box protein AGL42-like [Cucurbita pepo subsp. pepo]3.0e-3996.59Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCD EVSVMIFSQKGRLYEFSSTDIHKSI+RYRWYGKDGQTN LRSEVYMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

TrEMBL top hitse value%identityAlignment
A0A0A0KL39 Uncharacterized protein4.9e-3282.95Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGKVEMKRIEN+T+RQVTFSKRRNGLLKKAYELSVLCD EVSV+IFSQKGRLYEFSS+D+ K+I+RYR +GKDGQ+N  RSE YMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

A0A6J1BPQ9 MADS-box protein AGL42-like isoform X23.4e-3385.23Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGKVEMKRIEN+T+RQVTFSKRRNGLLKKAYELSVLCD +VSV+IFSQKGRLYEFSS+D+ KSI+RY  YGKDGQTNA RSE YMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

A0A6J1BSU4 MADS-box protein AGL42-like isoform X13.4e-3385.23Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGKVEMKRIEN+T+RQVTFSKRRNGLLKKAYELSVLCD +VSV+IFSQKGRLYEFSS+D+ KSI+RY  YGKDGQTNA RSE YMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

A0A6J1GZS6 MADS-box protein AGL42-like2.2e-4098.86Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCD EVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

A0A6J1K3R0 MADS-box protein AGL42-like3.5e-3895.45Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRG+VEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCD EVSVMIFSQKGRLYEFSSTDIHKSI+RYR YGKDGQTNALRSEVYMQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

SwissProt top hitse value%identityAlignment
O64645 MADS-box protein SOC14.8e-2465.91Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGK +MKRIENAT+RQVTFSKRRNGLLKKA+ELSVLCD EVS++IFS KG+LYEF+S+++  +I RY  + KD  +    SE  MQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

O82743 Agamous-like MADS-box protein AGL194.0e-2364.04Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQA
        MVRGK EMKRIENAT+RQVTFSKRRNGLLKKA+ELSVLCD EV+++IFS + +LYEFSS+ I  +I+RY+   K+   N  R++   QA
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQA

Q9FIS1 MADS-box protein AGL421.7e-2970.45Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGK+EMK+IENAT+RQVTFSKRRNGLLKKAYELSVLCD ++S++IFSQ+GRLYEFSS+D+ K+I+RYR Y KD +T+   S++++Q
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

Q9FLH5 MADS-box protein AGL723.1e-2369.33Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKD
        MVRGK+E+K+IEN T+RQVTFSKRR+GL KKA+ELSVLCD +V+ MIFSQKGRLYEF+S+DI  +I+RY  Y ++
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKD

Q9XJ60 MADS-box transcription factor 501.4e-2367.09Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTN
        MVRGK +MKRIEN T+RQVTFSKRRNGLLKKA+ELSVLCD EV++++FS +G+LYEF+S    K+I+RYR Y K+   N
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTN

Arabidopsis top hitse value%identityAlignment
AT2G45660.1 AGAMOUS-like 203.4e-2565.91Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGK +MKRIENAT+RQVTFSKRRNGLLKKA+ELSVLCD EVS++IFS KG+LYEF+S+++  +I RY  + KD  +    SE  MQ
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

AT5G62165.1 AGAMOUS-like 421.2e-3070.45Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGK+EMK+IENAT+RQVTFSKRRNGLLKKAYELSVLCD ++S++IFSQ+GRLYEFSS+D+ K+I+RYR Y KD +T+   S++++Q
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

AT5G62165.2 AGAMOUS-like 421.2e-3070.45Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGK+EMK+IENAT+RQVTFSKRRNGLLKKAYELSVLCD ++S++IFSQ+GRLYEFSS+D+ K+I+RYR Y KD +T+   S++++Q
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

AT5G62165.3 AGAMOUS-like 421.2e-3070.45Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGK+EMK+IENAT+RQVTFSKRRNGLLKKAYELSVLCD ++S++IFSQ+GRLYEFSS+D+ K+I+RYR Y KD +T+   S++++Q
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ

AT5G62165.4 AGAMOUS-like 421.2e-3070.45Show/hide
Query:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ
        MVRGK+EMK+IENAT+RQVTFSKRRNGLLKKAYELSVLCD ++S++IFSQ+GRLYEFSS+D+ K+I+RYR Y KD +T+   S++++Q
Subjt:  MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAGGGAAGGTCGAAATGAAACGAATAGAAAACGCGACAAATCGTCAAGTGACATTCTCAAAGAGACGAAATGGGCTGCTGAAGAAGGCGTACGAGCTCTCTGT
TCTGTGCGATGTTGAAGTTTCTGTCATGATTTTCTCTCAGAAAGGAAGGCTTTATGAGTTCTCAAGCACCGATATACATAAGTCCATCCAGCGTTATCGATGGTATGGAA
AAGATGGACAGACCAACGCTCTTCGCTCCGAAGTATACATGCAGGCATGCGGAATGCACATCCATGTATATTTCTGTCGACTTGTCTCGGCTGTGCTCGACCTAGGCCGA
GGCGGTTCTAGGTTCAATATGAACATTGTTTTGGGCAACTTTTCGTTAAGCCATGTCTCCTCGAATGCTCTCAAGAATGAAGATAATACAAAGGTTTTGTCGACCCTCTT
AAAACTCCGATGTAACGGTAGTTTTGGGCAATTTTTCGTCGATGATTATAAATTCAATCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGAGGGAAGGTCGAAATGAAACGAATAGAAAACGCGACAAATCGTCAAGTGACATTCTCAAAGAGACGAAATGGGCTGCTGAAGAAGGCGTACGAGCTCTCTGT
TCTGTGCGATGTTGAAGTTTCTGTCATGATTTTCTCTCAGAAAGGAAGGCTTTATGAGTTCTCAAGCACCGATATACATAAGTCCATCCAGCGTTATCGATGGTATGGAA
AAGATGGACAGACCAACGCTCTTCGCTCCGAAGTATACATGCAGGCATGCGGAATGCACATCCATGTATATTTCTGTCGACTTGTCTCGGCTGTGCTCGACCTAGGCCGA
GGCGGTTCTAGGTTCAATATGAACATTGTTTTGGGCAACTTTTCGTTAAGCCATGTCTCCTCGAATGCTCTCAAGAATGAAGATAATACAAAGGTTTTGTCGACCCTCTT
AAAACTCCGATGTAACGGTAGTTTTGGGCAATTTTTCGTCGATGATTATAAATTCAATCCATAA
Protein sequenceShow/hide protein sequence
MVRGKVEMKRIENATNRQVTFSKRRNGLLKKAYELSVLCDVEVSVMIFSQKGRLYEFSSTDIHKSIQRYRWYGKDGQTNALRSEVYMQACGMHIHVYFCRLVSAVLDLGR
GGSRFNMNIVLGNFSLSHVSSNALKNEDNTKVLSTLLKLRCNGSFGQFFVDDYKFNP