; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08452 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08452
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMADS-box protein AGL42-like
Genome locationCarg_Chr02:5617406..5619019
RNA-Seq ExpressionCarg08452
SyntenyCarg08452
Gene Ontology termsGO:0009838 - abscission (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010150 - leaf senescence (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0080187 - floral organ senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605687.1 MADS-box protein AGL42, partial [Cucurbita argyrosperma subsp. sororia]7.6e-62100Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
        GGIMSLLCTQNAQPSHINTKLFIGLPCS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

KAG7035595.1 MADS-box protein AGL42, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-66100Show/hide
Query:  MEYLNCMQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEG
        MEYLNCMQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEG
Subjt:  MEYLNCMQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEG

Query:  GGEDEGGGIMSLLCTQNAQPSHINTKLFIGLPCS
        GGEDEGGGIMSLLCTQNAQPSHINTKLFIGLPCS
Subjt:  GGEDEGGGIMSLLCTQNAQPSHINTKLFIGLPCS

XP_022957636.1 MADS-box protein AGL42-like [Cucurbita moschata]1.9e-6098.44Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQMKQEADMTAKKMEQLETSQKKLLGRGL SCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGE+EG
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
        GGIMSLLCTQNAQPSHINTKLFIGLPCS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

XP_022995310.1 MADS-box protein AGL42-like [Cucurbita maxima]1.9e-6098.44Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
        G IMSLLCTQN QPSHINTKLFIGLPCS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

XP_023532454.1 MADS-box protein AGL42-like [Cucurbita pepo subsp. pepo]7.6e-62100Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
        GGIMSLLCTQNAQPSHINTKLFIGLPCS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

TrEMBL top hitse value%identityAlignment
A0A0A0KL39 Uncharacterized protein5.1e-4071.97Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQ+KQEA+MTAKK+EQLE SQ+KLLGRGLDSCS EEIREIE QL+LSLTRIRE K+QLFKEQ+ KLIEKGKLL+EEN+KL+AKCGT+PW+ EG   D G
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQ--NAQPS--HINTKLFIGLPCS
          +MS LC+Q  N+Q S  H+ T LFIGL CS
Subjt:  GGIMSLLCTQ--NAQPS--HINTKLFIGLPCS

A0A6J1EST4 MADS-box protein AGL42-like8.8e-4075Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQM+QEA+MTAKK+E+LE SQKKLLGRGLDSCS EE+REIE QLILSLTRIRE K+ LFKEQ+ KLIEKGKLLIEEN KL+AKCGT+PWE   GG +  
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
        GGIMS LC+Q+ Q S I T+LFIGL CS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

A0A6J1GZS6 MADS-box protein AGL42-like9.0e-6198.44Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQMKQEADMTAKKMEQLETSQKKLLGRGL SCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGE+EG
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
        GGIMSLLCTQNAQPSHINTKLFIGLPCS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

A0A6J1I2F0 MADS-box protein AGL42-like6.1e-4176.56Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQMKQEA+MTAKK+E+LE SQKKLLGRGLDSCS EE+REIE QLILSLTRIRERK+ LFKEQ+ KLIEKGKLLIEEN KL+AKCGT+PWE E  G +  
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
        GGIMS LC+Q+ Q S I T+LFIGL CS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

A0A6J1K3R0 MADS-box protein AGL42-like9.0e-6198.44Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
        G IMSLLCTQN QPSHINTKLFIGLPCS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

SwissProt top hitse value%identityAlignment
O64645 MADS-box protein SOC12.4e-1845.31Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQ +K EA    KK+EQLE S++KLLG G+ +CS+EE+++IE QL  S+  IR RK+Q+FKEQ  +L +K K L  EN KL+ K G+   E       E 
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
         G       +++  S + T+LFIGLPCS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

Q38838 Agamous-like MADS-box protein AGL147.5e-1237.59Show/hide
Query:  QQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEGG
        QQ K E    A+K+E LE S +K++G GLD+ S+EE++++E QL  SL +IR +K QL +E+  KL EK + LI EN  L  KC           E +G 
Subjt:  QQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEGG

Query:  GIMSLLCTQNA--------QPSHINTKLFIGLP
        GI+  + + ++            + T LFIG P
Subjt:  GIMSLLCTQNA--------QPSHINTKLFIGLP

Q9FIS1 MADS-box protein AGL423.1e-1846.83Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        +QQ+KQEA     K+E LE  ++KLLG+G+ SCSLEE++EI++QL  SL ++RERK+QLFKEQ  KL  K K L+EEN+KL  K    PW   G   D+ 
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLP
             ++         + T LFIGLP
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLP

Q9LT93 MADS-box protein AGL713.0e-1338.89Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        +Q++K E D   KK++ LE   +KLLG+GLDSCS+ E++EI+TQ+  SL  +R RK++L+ +Q  KL EK + L+ E  +L  +           G  EG
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLP
        G        +    S + T LFIGLP
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLP

Q9XJ60 MADS-box transcription factor 503.0e-1341.86Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQP---WEAEGGGE
        ++Q+K +AD  AKK+E LET ++KLLG  LD CS+EE+  +E +L  SL  IR RK++L +EQ  KL EK   L ++N +L  KC  QP          E
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQP---WEAEGGGE

Query:  DEGGGIMSLLCTQNAQPSHINTKLFIGLP
        DE           N     + T+LFIGLP
Subjt:  DEGGGIMSLLCTQNAQPSHINTKLFIGLP

Arabidopsis top hitse value%identityAlignment
AT2G45660.1 AGAMOUS-like 201.7e-1945.31Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        MQ +K EA    KK+EQLE S++KLLG G+ +CS+EE+++IE QL  S+  IR RK+Q+FKEQ  +L +K K L  EN KL+ K G+   E       E 
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLPCS
         G       +++  S + T+LFIGLPCS
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLPCS

AT5G62165.1 AGAMOUS-like 422.2e-1946.83Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        +QQ+KQEA     K+E LE  ++KLLG+G+ SCSLEE++EI++QL  SL ++RERK+QLFKEQ  KL  K K L+EEN+KL  K    PW   G   D+ 
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLP
             ++         + T LFIGLP
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLP

AT5G62165.2 AGAMOUS-like 422.2e-1946.83Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        +QQ+KQEA     K+E LE  ++KLLG+G+ SCSLEE++EI++QL  SL ++RERK+QLFKEQ  KL  K K L+EEN+KL  K    PW   G   D+ 
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLP
             ++         + T LFIGLP
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLP

AT5G62165.3 AGAMOUS-like 422.2e-1946.83Show/hide
Query:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG
        +QQ+KQEA     K+E LE  ++KLLG+G+ SCSLEE++EI++QL  SL ++RERK+QLFKEQ  KL  K K L+EEN+KL  K    PW   G   D+ 
Subjt:  MQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEG

Query:  GGIMSLLCTQNAQPSHINTKLFIGLP
             ++         + T LFIGLP
Subjt:  GGIMSLLCTQNAQPSHINTKLFIGLP

AT5G62165.5 AGAMOUS-like 424.3e-1545Show/hide
Query:  TAKKMEQLETSQK----KLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEGGGIMSL
        T K M+   T+ K    KLLG+G+ SCSLEE++EI++QL  SL ++RERK+QLFKEQ  KL  K K L+EEN+KL  K    PW   G   D+      +
Subjt:  TAKKMEQLETSQK----KLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEGGGIMSL

Query:  LCTQNAQPSHINTKLFIGLP
        +         + T LFIGLP
Subjt:  LCTQNAQPSHINTKLFIGLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATACTTAAATTGTATGCAGCAAATGAAGCAGGAAGCTGACATGACGGCAAAGAAAATGGAGCAACTTGAAACTTCACAAAAGAAGCTGTTGGGACGTGGGTTGGA
TTCGTGTTCGTTGGAGGAAATCCGAGAGATTGAAACCCAGTTGATACTTAGCTTGACTCGTATTCGAGAAAGAAAGTCTCAGCTATTCAAGGAGCAGAGAATGAAGCTGA
TTGAAAAGGGGAAACTGCTTATAGAGGAAAATATAAAGTTAGCTGCAAAGTGTGGTACTCAGCCATGGGAGGCAGAAGGTGGTGGTGAAGATGAGGGAGGAGGGATTATG
AGTTTATTATGCACCCAAAATGCCCAACCTTCTCATATCAACACTAAATTGTTCATTGGATTGCCTTGCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATACTTAAATTGTATGCAGCAAATGAAGCAGGAAGCTGACATGACGGCAAAGAAAATGGAGCAACTTGAAACTTCACAAAAGAAGCTGTTGGGACGTGGGTTGGA
TTCGTGTTCGTTGGAGGAAATCCGAGAGATTGAAACCCAGTTGATACTTAGCTTGACTCGTATTCGAGAAAGAAAGTCTCAGCTATTCAAGGAGCAGAGAATGAAGCTGA
TTGAAAAGGGGAAACTGCTTATAGAGGAAAATATAAAGTTAGCTGCAAAGTGTGGTACTCAGCCATGGGAGGCAGAAGGTGGTGGTGAAGATGAGGGAGGAGGGATTATG
AGTTTATTATGCACCCAAAATGCCCAACCTTCTCATATCAACACTAAATTGTTCATTGGATTGCCTTGCTCATGATCCAGTTCTAAACTTTTTACTACCATTTTAAGCCT
TGCTCGTATAGAAATTCATTGATATAAGGAATGAAATGTAACCTTTATTTCA
Protein sequenceShow/hide protein sequence
MEYLNCMQQMKQEADMTAKKMEQLETSQKKLLGRGLDSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKCGTQPWEAEGGGEDEGGGIM
SLLCTQNAQPSHINTKLFIGLPCS