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Carg08496 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08496
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box domain-containing protein
Genome locationCarg_Chr02:5379433..5380611
RNA-Seq ExpressionCarg08496
SyntenyCarg08496
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605642.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]3.5e-5798.08Show/hide
Query:  KGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIV
        KGIYFDLSEEKL+EFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIV
Subjt:  KGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIV

Query:  DQSI
        DQS+
Subjt:  DQSI

KAG7035550.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-4248.24Show/hide
Query:  PAARVHSPDRFIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDH-CGWFVK
        P     S   FI     GVYWNGA++W+RY    I  DL EEKLH   +P AS+    + +KYFG  CG LYW+EGV+ E  ELIVYEM DD  CGW +K
Subjt:  PAARVHSPDRFIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDH-CGWFVK

Query:  YRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIVDQS---------------------IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV
        YRVDL+ V + + +P SG   AL SKF+VL IVDQS                      VN  SG FE   ++N GRT+NTPHG   I+A  YI+SLACV
Subjt:  YRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIVDQS---------------------IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV

KAG7035551.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-143100Show/hide
Query:  MLRRKPPKIITRSTTAAAKSLVDNDDLLLHTILYDHQITKSFAFELWIPQTTKSRFTRLILGSGGPAARVHSPDRFIKEIDRGVYWNGAVHWVRYCGKGI
        MLRRKPPKIITRSTTAAAKSLVDNDDLLLHTILYDHQITKSFAFELWIPQTTKSRFTRLILGSGGPAARVHSPDRFIKEIDRGVYWNGAVHWVRYCGKGI
Subjt:  MLRRKPPKIITRSTTAAAKSLVDNDDLLLHTILYDHQITKSFAFELWIPQTTKSRFTRLILGSGGPAARVHSPDRFIKEIDRGVYWNGAVHWVRYCGKGI

Query:  YFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIVDQS
        YFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIVDQS
Subjt:  YFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIVDQS

Query:  IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV
        IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV
Subjt:  IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV

XP_022958235.1 F-box protein At5g07610-like [Cucurbita moschata]2.0e-4452.69Show/hide
Query:  FIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDH-CGWFVKYRVDLKWVWS
        FI     GVYWNGA++W+RY    I  DL EEKLH   +P AS+  G + +KYFG  CG LYW+EGV+ E  ELIVYEM DD  CGW VKYRVDL+ V S
Subjt:  FIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDH-CGWFVKYRVDLKWVWS

Query:  WYQNPGSGGMEALYSKFTVLAIVDQS------------------IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV
         + +P SG   AL SKF+VLAIVDQS                   VN  SG FE   ++N GRT+NTPHG   I+A  YI+SLACV
Subjt:  WYQNPGSGGMEALYSKFTVLAIVDQS------------------IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV

XP_023533019.1 F-box protein At5g07610-like [Cucurbita pepo subsp. pepo]4.9e-4350.27Show/hide
Query:  FIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDH-CGWFVKYRVDLKWVWS
        FI     GVYWNGA++W+RY    I  DL +EKLH   +P AS+  G + +KYFG  CG LYW+EGV+ +  E+IVYEM DD  CGW V+YRVDL+ V S
Subjt:  FIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDH-CGWFVKYRVDLKWVWS

Query:  WYQNPGSGGMEALYSKFTVLAIVDQS-------------------IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV
         + +P SG   AL SKF+VLAIVDQS                    VN  SG FE   ++N GRT+NTPHG   I+A  YI+SLACV
Subjt:  WYQNPGSGGMEALYSKFTVLAIVDQS-------------------IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV

TrEMBL top hitse value%identityAlignment
A0A0A0KPG1 F-box domain-containing protein6.0e-3138.08Show/hide
Query:  NDDLLLHTILYDHQITKSFAFELWIPQTTKSRFTRLILGSGGPAARVHSPDRFIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGH
        + D  +  + Y    T +F  E++   T          G   P   V S    ++  D GVYWN AVHW+      +YFDL EEK+H+ P+P   + +  
Subjt:  NDDLLLHTILYDHQITKSFAFELWIPQTTKSRFTRLILGSGGPAARVHSPDRFIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGH

Query:  KIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQN--PGSGGME-ALYSKFTVLAI------------VDQSI--VNAKS
        + VKYFG C G+L  +E  E + MEL VY+M+DDHCGWFV+YRVDL+ V   +    P     +  L+ KF+V A+            VD  I  VN +S
Subjt:  KIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQN--PGSGGME-ALYSKFTVLAI------------VDQSI--VNAKS

Query:  GSFEMDGFINIGRTSN---TPHGFRTIEALLYIESLACV
        G FE  G I  G  S+      GF  I+A LYIESLA V
Subjt:  GSFEMDGFINIGRTSN---TPHGFRTIEALLYIESLACV

A0A1S3ASN6 F-box protein At5g07610-like3.5e-3146.99Show/hide
Query:  DRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPG
        D GVYWN AVHW+      +YFDL EEKLHE P+P        + V+YFG C G+L+ +E  E E MEL VY+M+D+H GWFVKYRVDL+ V   +    
Subjt:  DRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPG

Query:  SGGME---ALYSKFTVLAIV---DQSI------------VNAKSGSFEMDGFI-NIGRTSNTP--HGFRTIEALLYIESLACV
           M+     + KF+V AIV   DQ              VN +SG FE  G I N GRTS  P   GF  I+A LYIE+LACV
Subjt:  SGGME---ALYSKFTVLAIV---DQSI------------VNAKSGSFEMDGFI-NIGRTSNTP--HGFRTIEALLYIESLACV

A0A5A7TJJ2 F-box protein3.5e-3146.99Show/hide
Query:  DRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPG
        D GVYWN AVHW+      +YFDL EEKLHE P+P        + V+YFG C G+L+ +E  E E MEL VY+M+D+H GWFVKYRVDL+ V   +    
Subjt:  DRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPG

Query:  SGGME---ALYSKFTVLAIV---DQSI------------VNAKSGSFEMDGFI-NIGRTSNTP--HGFRTIEALLYIESLACV
           M+     + KF+V AIV   DQ              VN +SG FE  G I N GRTS  P   GF  I+A LYIE+LACV
Subjt:  SGGME---ALYSKFTVLAIV---DQSI------------VNAKSGSFEMDGFI-NIGRTSNTP--HGFRTIEALLYIESLACV

A0A6J1H2Y4 F-box protein At5g07610-like9.6e-4552.69Show/hide
Query:  FIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDH-CGWFVKYRVDLKWVWS
        FI     GVYWNGA++W+RY    I  DL EEKLH   +P AS+  G + +KYFG  CG LYW+EGV+ E  ELIVYEM DD  CGW VKYRVDL+ V S
Subjt:  FIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDH-CGWFVKYRVDLKWVWS

Query:  WYQNPGSGGMEALYSKFTVLAIVDQS------------------IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV
         + +P SG   AL SKF+VLAIVDQS                   VN  SG FE   ++N GRT+NTPHG   I+A  YI+SLACV
Subjt:  WYQNPGSGGMEALYSKFTVLAIVDQS------------------IVNAKSGSFEMDGFINIGRTSNTPHGFRTIEALLYIESLACV

A0A6J1I3L0 F-box protein At5g076102.3e-3043.72Show/hide
Query:  DRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQN--
        D GVYWN AVHW+      +YFDL EEKLHE P+P   +    + V+YFG C G+L+ +E  E + +E  VYEM+DDH GWFVKYRVDL  V   +    
Subjt:  DRGVYWNGAVHWVRYCGKGIYFDLSEEKLHEFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQN--

Query:  PGSGGME-ALYSKFTVLAIVDQS-----------------IVNAKSGSFE-MDGFINIGRTSNTPHGFRTIEALLYIESLACV
        P    +E     KF+V+AIVD +                  VN +SG FE + G  N G  S     F  +EA LYIESL CV
Subjt:  PGSGGME-ALYSKFTVLAIVDQS-----------------IVNAKSGSFE-MDGFINIGRTSNTPHGFRTIEALLYIESLACV

SwissProt top hitse value%identityAlignment
Q9FLS0 F-box protein At5g076101.9e-1032.69Show/hide
Query:  SPDRFIKEIDRGVYWNGAVHWVRYCGKG-IYFDLSEEKLHEFPVPEASND----RGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYR
        SP  FI E    V+WNGAV+W  +  +  + FD++ +++   P+P+  ++       +I+ +     G+LY++E        L VYEME +   W VKY 
Subjt:  SPDRFIKEIDRGVYWNGAVHWVRYCGKG-IYFDLSEEKLHEFPVPEASND----RGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYR

Query:  VDLK
        VDL+
Subjt:  VDLK

Arabidopsis top hitse value%identityAlignment
AT5G07610.1 F-box family protein1.4e-1132.69Show/hide
Query:  SPDRFIKEIDRGVYWNGAVHWVRYCGKG-IYFDLSEEKLHEFPVPEASND----RGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYR
        SP  FI E    V+WNGAV+W  +  +  + FD++ +++   P+P+  ++       +I+ +     G+LY++E        L VYEME +   W VKY 
Subjt:  SPDRFIKEIDRGVYWNGAVHWVRYCGKG-IYFDLSEEKLHEFPVPEASND----RGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYR

Query:  VDLK
        VDL+
Subjt:  VDLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCGCCGAAAACCACCAAAAATCATCACCCGGTCCACCACCGCCGCAGCCAAATCACTCGTCGATAACGACGATCTCTTACTCCATACGATCCTTTACGATCACCA
AATTACGAAGTCGTTTGCTTTCGAGTTGTGGATTCCACAAACTACGAAATCAAGATTTACTCGTCTGATTCTGGGTTCTGGAGGACCTGCTGCGAGGGTTCATTCGCCAG
ATCGATTCATCAAGGAAATCGACCGTGGAGTGTATTGGAATGGAGCTGTTCATTGGGTGCGGTATTGTGGAAAGGGAATATACTTCGATTTGAGCGAAGAGAAACTCCAT
GAATTTCCAGTACCTGAAGCTTCCAATGATCGGGGACACAAAATTGTGAAGTATTTTGGAGGTTGCTGTGGGCATCTTTATTGGGTTGAAGGTGTTGAACTTGAACCTAT
GGAATTGATTGTGTACGAGATGGAAGATGATCATTGTGGGTGGTTTGTGAAGTATAGGGTTGATCTTAAATGGGTGTGGAGTTGGTACCAAAATCCGGGTTCGGGTGGAA
TGGAGGCGTTGTACTCCAAGTTCACAGTGCTCGCCATTGTTGATCAGAGCATAGTGAATGCGAAGAGTGGGAGCTTTGAAATGGATGGGTTCATAAATATTGGACGAACT
TCGAACACTCCCCACGGGTTTCGAACAATTGAGGCCCTTTTGTACATTGAAAGCCTTGCCTGTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCCGCCGAAAACCACCAAAAATCATCACCCGGTCCACCACCGCCGCAGCCAAATCACTCGTCGATAACGACGATCTCTTACTCCATACGATCCTTTACGATCACCA
AATTACGAAGTCGTTTGCTTTCGAGTTGTGGATTCCACAAACTACGAAATCAAGATTTACTCGTCTGATTCTGGGTTCTGGAGGACCTGCTGCGAGGGTTCATTCGCCAG
ATCGATTCATCAAGGAAATCGACCGTGGAGTGTATTGGAATGGAGCTGTTCATTGGGTGCGGTATTGTGGAAAGGGAATATACTTCGATTTGAGCGAAGAGAAACTCCAT
GAATTTCCAGTACCTGAAGCTTCCAATGATCGGGGACACAAAATTGTGAAGTATTTTGGAGGTTGCTGTGGGCATCTTTATTGGGTTGAAGGTGTTGAACTTGAACCTAT
GGAATTGATTGTGTACGAGATGGAAGATGATCATTGTGGGTGGTTTGTGAAGTATAGGGTTGATCTTAAATGGGTGTGGAGTTGGTACCAAAATCCGGGTTCGGGTGGAA
TGGAGGCGTTGTACTCCAAGTTCACAGTGCTCGCCATTGTTGATCAGAGCATAGTGAATGCGAAGAGTGGGAGCTTTGAAATGGATGGGTTCATAAATATTGGACGAACT
TCGAACACTCCCCACGGGTTTCGAACAATTGAGGCCCTTTTGTACATTGAAAGCCTTGCCTGTGTTTAG
Protein sequenceShow/hide protein sequence
MLRRKPPKIITRSTTAAAKSLVDNDDLLLHTILYDHQITKSFAFELWIPQTTKSRFTRLILGSGGPAARVHSPDRFIKEIDRGVYWNGAVHWVRYCGKGIYFDLSEEKLH
EFPVPEASNDRGHKIVKYFGGCCGHLYWVEGVELEPMELIVYEMEDDHCGWFVKYRVDLKWVWSWYQNPGSGGMEALYSKFTVLAIVDQSIVNAKSGSFEMDGFINIGRT
SNTPHGFRTIEALLYIESLACV