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Carg08542 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08542
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:5070851..5071593
RNA-Seq ExpressionCarg08542
SyntenyCarg08542
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035507.1 hypothetical protein SDJN02_02303, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-54100Show/hide
Query:  MSNFDQRRTEKEERGGLEIPCTKILHKPASAFSIRTPIIITGGRTEALCFFLLLTLLLFYIFLLFPLFPPLPVNIIALYSLPPHLVTPPERRVQKEEEPQ
        MSNFDQRRTEKEERGGLEIPCTKILHKPASAFSIRTPIIITGGRTEALCFFLLLTLLLFYIFLLFPLFPPLPVNIIALYSLPPHLVTPPERRVQKEEEPQ
Subjt:  MSNFDQRRTEKEERGGLEIPCTKILHKPASAFSIRTPIIITGGRTEALCFFLLLTLLLFYIFLLFPLFPPLPVNIIALYSLPPHLVTPPERRVQKEEEPQ

Query:  LGLTRVLGSPRMP
        LGLTRVLGSPRMP
Subjt:  LGLTRVLGSPRMP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATTTTGACCAAAGAAGAACAGAAAAGGAAGAAAGAGGGGGACTTGAAATTCCGTGTACTAAGATTCTCCACAAACCAGCTTCAGCCTTCAGCATCCGCACTCC
AATTATTATCACAGGCGGTCGCACCGAGGCGCTTTGCTTTTTTTTACTCCTTACCCTTCTGCTTTTCTATATTTTCCTCCTCTTCCCTCTTTTCCCTCCTCTTCCAGTTA
ACATCATCGCACTGTATTCTTTGCCTCCGCATCTGGTAACTCCTCCGGAGAGAAGAGTCCAAAAAGAGGAAGAGCCCCAGTTGGGTTTGACCCGAGTTCTGGGGTCACCC
AGGATGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAATTTTGACCAAAGAAGAACAGAAAAGGAAGAAAGAGGGGGACTTGAAATTCCGTGTACTAAGATTCTCCACAAACCAGCTTCAGCCTTCAGCATCCGCACTCC
AATTATTATCACAGGCGGTCGCACCGAGGCGCTTTGCTTTTTTTTACTCCTTACCCTTCTGCTTTTCTATATTTTCCTCCTCTTCCCTCTTTTCCCTCCTCTTCCAGTTA
ACATCATCGCACTGTATTCTTTGCCTCCGCATCTGGTAACTCCTCCGGAGAGAAGAGTCCAAAAAGAGGAAGAGCCCCAGTTGGGTTTGACCCGAGTTCTGGGGTCACCC
AGGATGCCATGA
Protein sequenceShow/hide protein sequence
MSNFDQRRTEKEERGGLEIPCTKILHKPASAFSIRTPIIITGGRTEALCFFLLLTLLLFYIFLLFPLFPPLPVNIIALYSLPPHLVTPPERRVQKEEEPQLGLTRVLGSP
RMP