CuGenDBv2

Gene ID	Carg08555
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Genome location	Carg_Chr02:4988940..4991922
RNA-Seq Expression	Carg08555
Synteny	Carg08555
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006281 - DNA repair (biological process) GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domains	IPR003021 - Rad1/Rec1/Rad17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605579.1 Cell cycle checkpoint protein RAD1, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-166

95.54

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

KAG7035494.1 Cell cycle checkpoint protein RAD1 [Cucurbita argyrosperma subsp. argyrosperma]

5.2e-178

100

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Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
        FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

XP_022957691.1 uncharacterized protein LOC111459157 isoform X1 [Cucurbita moschata]

2.2e-165

94.9

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Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

XP_022996322.1 uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]

1.0e-162

93.63

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Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

XP_023534468.1 uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]

1.9e-164

93.95

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Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4R8 uncharacterized protein LOC103486009

4.3e-154

87.26

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD ++PDLVC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LS +E+KYPGPDMQLLLK+VDS DACIYAEIRTRIP+TISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDR VSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTSH HIDSAGYQQPSRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEED+++D
Subjt:  IEFFVKPEEDTTDD

A0A5D3DUR6 Syntaxin-22-like protein

4.3e-154

87.26

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD ++PDLVC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LS +E+KYPGPDMQLLLK+VDS DACIYAEIRTRIP+TISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDR VSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTSH HIDSAGYQQPSRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEED+++D
Subjt:  IEFFVKPEEDTTDD

A0A6J1CW92 uncharacterized protein LOC111015362 isoform X1

2.8e-153

88.85

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD+++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEY+AQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
         S  EIKYPGPDMQLL+KSVDS DACIYAEIRTRIPETISWDY FEPAG SPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDR VSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQPSRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTT+D
Subjt:  IEFFVKPEEDTTDD

A0A6J1GZY3 uncharacterized protein LOC111459157 isoform X1

1.1e-165

94.9

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

A0A6J1K1L0 uncharacterized protein LOC111491589 isoform X1

5.1e-163

93.63

Show/hide

Query:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAW

Query:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAF
Subjt:  FVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

SwissProt top hits

e value

%identity

Alignment

Q9QWZ1 Cell cycle checkpoint protein RAD1

4.7e-17

25.08

Show/hide

Query:  LVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFS---VPGRLSIVEIKYP
        LV  LDNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q +VF  +    ++   F ++L I +D L+ F     PG L+ + + Y 
Subjt:  LVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFS---VPGRLSIVEIKYP

Query:  GPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSV---TFKGEGHGDLQAWFVINKL
        G    L+L  ++        +I T+ PE  + D++F    +      ++S  L+EA  +L+  G  +QI++ P  P     TF   G+  L         
Subjt:  GPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSV---TFKGEGHGDLQAWFVINKL

Query:  KFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVK
                 Y  ++DL+ +FHCD+    RYK   L  +T  +  S     + S  T  R G L +Q+++                  +  +I F+E++  
Subjt:  KFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVK

Query:  PEEDTTD
        P+E+  +
Subjt:  PEEDTTD

Arabidopsis top hits

e value

%identity

Alignment

AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs

7.5e-135

74.35

Show/hide

Query:  SSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRL
        SS A++ D+PDL+CQLDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKVYLQRE+F +YEY AQ RPRFG+SLG+ VD LNTFS PG  
Subjt:  SSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRL

Query:  SIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWF
        + +EIKYPGPDM+LLLKSVD+ ++CIY+EIRTRIPET++WDYNFE AGI+PL+FTVKSAALKEAIDDLEWPGSSVQISL+  PP V F+GEGHGDLQ   
Subjt:  SIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWF

Query:  VINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFI
                  +DFMYYANTDLL++FHCD  VSY YKYKFL ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV++     P ++SAGYQ PSRIA+I
Subjt:  VINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFI

Query:  EFFVKPEE
        EFFVKPEE
Subjt:  EFFVKPEE

AT4G17760.2 damaged DNA binding;exodeoxyribonuclease IIIs

4.2e-109

73.54

Show/hide

Query:  ESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISP
        ESGCLQAKVYLQRE+F +YEY AQ RPRFG+SLG+ VD LNTFS PG  + +EIKYPGPDM+LLLKSVD+ ++CIY+EIRTRIPET++WDYNFE AGI+P
Subjt:  ESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISP

Query:  LSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSV
        L+FTVKSAALKEAIDDLEWPGSSVQISL+  PP V F+GEGHGDLQ             +DFMYYANTDLL++FHCD  VSY YKYKFL ATT+NIP +V
Subjt:  LSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANTDLLISFHCDRPVSYRYKYKFLLATTSNIPSSV

Query:  IRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVKPEE
        +RENRGSKLTIGRGGMLKVQHLVSV++     P ++SAGYQ PSRIA+IEFFVKPEE
Subjt:  IRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVKPEE

Sequences

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CDS sequence

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ATGAGCTCATCGGCGGTGGATGCGGATTCCCCCGATCTGGTTTGTCAACTTGACAACGTCCAAGGTCTGGTGGATGCATTCACTGCCGTTCGATGGAAACGCCATCAGGA
TGCCGTAATCGAACTGTCAGAGCATGGCATCGTTTTGATCGTTGAAGAATCAGGCTGTCTTCAGGCGAAAGTGTATCTGCAGCGTGAGGTTTTCATTCGTTATGAATACA
CTGCACAAGCTCGGCCAAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAACACATTTTCTGTTCCTGGACGTTTAAGCATCGTTGAAATCAAATACCCGGGA
CCTGACATGCAACTTCTGCTCAAGTCAGTTGATTCATCAGATGCGTGTATTTATGCGGAGATCCGAACCAGAATCCCAGAAACGATTTCATGGGATTACAATTTTGAACC
TGCAGGAATTAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCGTCCAGATATCTCTAGAACCATCTC
CCCCTTCTGTCACCTTCAAAGGAGAAGGTCATGGAGACTTGCAGGCATGGTTTGTCATAAACAAACTGAAATTTGAAGTCCTTGTAGATTTCATGTACTATGCAAACACT
GATCTTTTGATCTCGTTCCATTGCGATCGTCCGGTGTCCTACAGGTACAAATACAAATTTCTACTAGCGACAACTTCGAACATACCGAGCAGTGTGATAAGAGAAAATAG
GGGAAGCAAGTTGACCATTGGGAGAGGAGGAATGCTAAAAGTTCAGCACCTGGTTTCTGTGGCAAGACCCTCCACTTCACACCCACATATAGATTCTGCTGGTTATCAGC
AACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGACACCACAGATGATTAG

mRNA sequence

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AAAGCCTGTTGAGTGTTGACTGAGAACGCATTCAAAAACGAAGAAGAGAACAGAGGGAGAAAAATTCACCGGCAATTTGGCGGGAAAGCTGAAACCATGAGCTCATCGGC
GGTGGATGCGGATTCCCCCGATCTGGTTTGTCAACTTGACAACGTCCAAGGTCTGGTGGATGCATTCACTGCCGTTCGATGGAAACGCCATCAGGATGCCGTAATCGAAC
TGTCAGAGCATGGCATCGTTTTGATCGTTGAAGAATCAGGCTGTCTTCAGGCGAAAGTGTATCTGCAGCGTGAGGTTTTCATTCGTTATGAATACACTGCACAAGCTCGG
CCAAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAACACATTTTCTGTTCCTGGACGTTTAAGCATCGTTGAAATCAAATACCCGGGACCTGACATGCAACT
TCTGCTCAAGTCAGTTGATTCATCAGATGCGTGTATTTATGCGGAGATCCGAACCAGAATCCCAGAAACGATTTCATGGGATTACAATTTTGAACCTGCAGGAATTAGCC
CACTCAGTTTCACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCGTCCAGATATCTCTAGAACCATCTCCCCCTTCTGTCACC
TTCAAAGGAGAAGGTCATGGAGACTTGCAGGCATGGTTTGTCATAAACAAACTGAAATTTGAAGTCCTTGTAGATTTCATGTACTATGCAAACACTGATCTTTTGATCTC
GTTCCATTGCGATCGTCCGGTGTCCTACAGGTACAAATACAAATTTCTACTAGCGACAACTTCGAACATACCGAGCAGTGTGATAAGAGAAAATAGGGGAAGCAAGTTGA
CCATTGGGAGAGGAGGAATGCTAAAAGTTCAGCACCTGGTTTCTGTGGCAAGACCCTCCACTTCACACCCACATATAGATTCTGCTGGTTATCAGCAACCCAGTAGAATT
GCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGACACCACAGATGATTAG

Protein sequence

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MSSSAVDADSPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYTAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPG
PDMQLLLKSVDSSDACIYAEIRTRIPETISWDYNFEPAGISPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQAWFVINKLKFEVLVDFMYYANT
DLLISFHCDRPVSYRYKYKFLLATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQPSRIAFIEFFVKPEEDTTDD

Carg08555 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome