; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08605 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08605
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAT-hook motif nuclear-localized protein
Genome locationCarg_Chr09:126484..127709
RNA-Seq ExpressionCarg08605
SyntenyCarg08605
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003680 - AT DNA binding (molecular function)
InterPro domainsIPR005175 - PPC domain
IPR039605 - AT-hook motif nuclear-localized protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591197.1 AT-hook motif nuclear-localized protein 10, partial [Cucurbita argyrosperma subsp. sororia]7.4e-3898.84Show/hide
Query:  NGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGVTDGGHKELRQ
        NGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGVTDGGHKEL Q
Subjt:  NGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGVTDGGHKELRQ

KAG7024082.1 AT-hook motif nuclear-localized protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-47100Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGVTDGGHKELRQTAAFYCTP
        MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGVTDGGHKELRQTAAFYCTP
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGVTDGGHKELRQTAAFYCTP

XP_004145559.1 AT-hook motif nuclear-localized protein 10 [Cucumis sativus]2.6e-3578.9Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT
        MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRSRTGGLSVSLSGPDGRVLGGG                  VT
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT

Query:  DGGHKELRQ
        DGGHKELRQ
Subjt:  DGGHKELRQ

XP_008453016.1 PREDICTED: AT-hook motif nuclear-localized protein 10 [Cucumis melo]2.9e-3477.98Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT
        MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRSRTGGLSVSLSGPDGRVLGGG                  VT
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT

Query:  DGGHKELRQ
        D GHKELRQ
Subjt:  DGGHKELRQ

XP_038898092.1 AT-hook motif nuclear-localized protein 10-like [Benincasa hispida]4.9e-3478.5Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV------------------T
        MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRSRTGGLSVSLSGPDGRVLGGGV                  T
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV------------------T

Query:  DGGHKEL
        DGGHKEL
Subjt:  DGGHKEL

TrEMBL top hitse value%identityAlignment
A0A0A0L0T7 AT-hook motif nuclear-localized protein1.3e-3578.9Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT
        MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRSRTGGLSVSLSGPDGRVLGGG                  VT
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT

Query:  DGGHKELRQ
        DGGHKELRQ
Subjt:  DGGHKELRQ

A0A1S3BWC6 AT-hook motif nuclear-localized protein1.4e-3477.98Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT
        MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRSRTGGLSVSLSGPDGRVLGGG                  VT
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT

Query:  DGGHKELRQ
        D GHKELRQ
Subjt:  DGGHKELRQ

A0A5A7VAQ2 AT-hook motif nuclear-localized protein1.4e-3477.98Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT
        MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRSRTGGLSVSLSGPDGRVLGGG                  VT
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT

Query:  DGGHKELRQ
        D GHKELRQ
Subjt:  DGGHKELRQ

A0A6J1BX81 AT-hook motif nuclear-localized protein1.0e-3275.23Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT
        MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRSRTGGLSVSLSGPDGRVLGGG                  V 
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT

Query:  DGGHKELRQ
        DG  KEL+Q
Subjt:  DGGHKELRQ

A0A6J1FR30 AT-hook motif nuclear-localized protein1.7e-3273.39Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT
        MS SQNGPRAVCIL+ANGA SNVTLRQPAMS GTVTY+G FEILSLSG YL +ENGGQRSRTGGLSVSLSGPDGRVLGGG                  V 
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGG------------------VT

Query:  DGGHKELRQ
        DGGHKEL+Q
Subjt:  DGGHKELRQ

SwissProt top hitse value%identityAlignment
O22812 AT-hook motif nuclear-localized protein 103.0e-2675.31Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        M+ + NGPRAVC+L+ANGA SNVTLRQ A S GTVTY+G FEILSLSGS+   EN GQRSRTGGLSVSLS PDG VLGG V
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

Q4V3E0 AT-hook motif nuclear-localized protein 72.0e-2569.14Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        +SFSQ GPRA+CIL+ANG  SNVTLRQP    GT+TY+G FEILSLSGS++ +EN G + R+GG+SVSL+GPDGRV+GGGV
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

Q8VYJ2 AT-hook motif nuclear-localized protein 15.7e-2566.67Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        +SFSQ GPR++C+L+ANG  S+VTLRQP  S GT+TY+G FEILSLSGS++ +++GG RSRTGG+SVSL+ PDGRV+GGG+
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

Q9FHM5 AT-hook motif nuclear-localized protein 41.4e-2367.9Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        M+FSQ G RA+CIL+ANG  SNVTLRQ   S GT+TY+G FEILSL+GS++ SE+GG RSR GG+SVSL+G DGRV GGG+
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

Q9SB31 AT-hook motif nuclear-localized protein 31.8e-2365.43Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        M+FSQ G RA+CIL+ANG  SNVTLRQ   S GT+TY+G FEILSL+GS++ +++GG RSR GG+SV L+GPDGRV GGG+
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

Arabidopsis top hitse value%identityAlignment
AT2G33620.1 AT hook motif DNA-binding family protein2.1e-2775.31Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        M+ + NGPRAVC+L+ANGA SNVTLRQ A S GTVTY+G FEILSLSGS+   EN GQRSRTGGLSVSLS PDG VLGG V
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

AT2G33620.2 AT hook motif DNA-binding family protein2.1e-2775.31Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        M+ + NGPRAVC+L+ANGA SNVTLRQ A S GTVTY+G FEILSLSGS+   EN GQRSRTGGLSVSLS PDG VLGG V
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

AT2G33620.3 AT hook motif DNA-binding family protein2.1e-2775.31Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        M+ + NGPRAVC+L+ANGA SNVTLRQ A S GTVTY+G FEILSLSGS+   EN GQRSRTGGLSVSLS PDG VLGG V
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

AT2G33620.4 AT hook motif DNA-binding family protein2.1e-2775.31Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        M+ + NGPRAVC+L+ANGA SNVTLRQ A S GTVTY+G FEILSLSGS+   EN GQRSRTGGLSVSLS PDG VLGG V
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV

AT4G00200.1 AT hook motif DNA-binding family protein1.4e-2669.14Show/hide
Query:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV
        +SFSQ GPRA+CIL+ANG  SNVTLRQP    GT+TY+G FEILSLSGS++ +EN G + R+GG+SVSL+GPDGRV+GGGV
Subjt:  MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTTTCCCAGAATGGGCCTAGAGCTGTTTGTATCCTTACAGCAAATGGTGCAACATCCAATGTGACTCTACGTCAACCAGCCATGTCTGCTGGAACCGTCACTTA
CCAGGGGCTATTCGAGATTTTGTCTCTATCTGGGTCATATCTCTTCTCCGAGAATGGCGGTCAGCGGAGTCGAACTGGAGGTCTAAGTGTTTCATTATCTGGACCGGACG
GTAGAGTATTAGGTGGTGGGGTGACTGATGGGGGGCACAAGGAGTTGAGGCAAACAGCCGCCTTTTACTGCACCCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTTTCCCAGAATGGGCCTAGAGCTGTTTGTATCCTTACAGCAAATGGTGCAACATCCAATGTGACTCTACGTCAACCAGCCATGTCTGCTGGAACCGTCACTTA
CCAGGGGCTATTCGAGATTTTGTCTCTATCTGGGTCATATCTCTTCTCCGAGAATGGCGGTCAGCGGAGTCGAACTGGAGGTCTAAGTGTTTCATTATCTGGACCGGACG
GTAGAGTATTAGGTGGTGGGGTGACTGATGGGGGGCACAAGGAGTTGAGGCAAACAGCCGCCTTTTACTGCACCCCATAAACTTGCTCCCATCCGTGCTGGAATGACGGG
AACTAGCAGCAGCCCGCCATCACTCGGTACTCTCAGTGAATCCTCGGGAGGGCCTGGTAGTCCATTTAATCACAGTGCTTGGATGTGAAACTCGAGGTTGCTTCGTTAAC
TCACTTGATTTGTTAACATGGCGGGGGCTAACGTGGAATCTGGTGTTCTGTTGTCTAATGTTACTCTAGTTCCAGTTTGAGTTGGCTTGGAAAGAACAGACGTGAAATAG
TTGTGTTTTGTTTTGATAGTGATGGCATTACAAATCAAATGATGTGTTCATTTCAATTATTGCGCTACTACTTTGATGCTAAATAGTCTCAAAGAGAGAGTATTATTACA
AACGGGACTTTTCTTTTTCAGCTATCTCTCGTTTGCTAACAACACATAGGGACTGCCCCTTTAACTCCTTGCTCTTTTCAACAATAAGCGCAAGGAGAAGAAGCCTAAAG
CAAAAGTCTGCCAAAACCATCCCCTTGAGTTAGCAGGATCCACCTTTCTGGCTAAGAACCATGCATAAGTACCCTCGCCAACATGCAGTAGAAAGGCTATGAGAAACACC
ATTCTCACCACTTGAATTGACCTAAAGAAGAAAAGGCTGATGCCTTTGAAAAATGGAACAGGTCCTACGTCTGGAAGGAAAGCACCACAAAACATGATGCTCATTCCGAC
AACACAGAACAGCCACGCATATATTGTTGGCCCATCGAGACTCTTCCTTTTTCTCTCCTGCCAATATGAGATGGTCGCAGCCATGCCCTCCTTT
Protein sequenceShow/hide protein sequence
MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGVTDGGHKELRQTAAFYCTP