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Carg08608 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08608
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLipoteichoic acid synthase
Genome locationCarg_Chr09:134609..136737
RNA-Seq ExpressionCarg08608
SyntenyCarg08608
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267529.1 unnamed protein product [Prunus armeniaca]2.1e-0674.42Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHLDD
        MALMRGEPLV KLAV AKY VLP AM AAL+YSPPDY    +D
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHLDD

GFY86319.1 hypothetical protein Acr_04g0010570 [Actinidia rufa]2.7e-0683.78Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY
        MA MRGEPLV KLAV AKYAVLP AM AAL+YSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY

KAG7024085.1 hypothetical protein SDJN02_12898, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-53100Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHLDDQPFNGHIRPSDHVGLHLQSCIPLMLIMNAWKQEDGGIQFQLSREWVGDKTTKDEGVG
        MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHLDDQPFNGHIRPSDHVGLHLQSCIPLMLIMNAWKQEDGGIQFQLSREWVGDKTTKDEGVG
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHLDDQPFNGHIRPSDHVGLHLQSCIPLMLIMNAWKQEDGGIQFQLSREWVGDKTTKDEGVG

Query:  EFWV
        EFWV
Subjt:  EFWV

KAG7037970.1 hypothetical protein SDJN02_01603, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-0958.67Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHL-DDQPFNGHI--------------RPSDHVGLHL
        MALM+GEPLVRKLAVFAKY VLP AMAAAL+YSPPDY +   DD    G +              RPSDHV L L
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHL-DDQPFNGHI--------------RPSDHVGLHL

KGN55532.1 hypothetical protein Csa_011995 [Cucumis sativus]1.6e-0683.78Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY
        MALM+GEPL+RKLAVFA Y VLP AMAAAL+YSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY

TrEMBL top hitse value%identityAlignment
A0A0A0L4N8 Uncharacterized protein7.6e-0783.78Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY
        MALM+GEPL+RKLAVFA Y VLP AMAAAL+YSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY

A0A2R6PZ99 DNA helicase3.8e-0681.08Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY
        M  MRGEPLV KLAV AKYAVLP AM AAL+YSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY

A0A5N6RC88 Uncharacterized protein1.7e-0681.08Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY
        MALMRGEPLV+KLA+ AKY VLP AM AAL+YSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY

A0A6J5TUT5 Uncharacterized protein9.9e-0774.42Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHLDD
        MALMRGEPLV KLAV AKY VLP AM AAL+YSPPDY    +D
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHLDD

A0A7J0EK53 Uncharacterized protein1.3e-0683.78Show/hide
Query:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY
        MA MRGEPLV KLAV AKYAVLP AM AAL+YSPPDY
Subjt:  MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTAATGAGAGGAGAGCCGCTGGTGAGGAAACTCGCTGTGTTCGCCAAGTACGCTGTTCTGCCGGCAGCCATGGCCGCTGCTCTCCTTTACTCTCCTCCCGATTA
CGATCATCATCTAGATGACCAGCCATTTAATGGGCATATTAGACCGTCTGATCATGTAGGCTTGCATTTGCAGAGTTGTATTCCTCTCATGTTGATAATGAATGCATGGA
AACAAGAGGATGGTGGAATACAATTCCAACTTAGCCGGGAATGGGTTGGGGACAAAACAACGAAGGATGAGGGAGTTGGAGAGTTTTGGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTAATGAGAGGAGAGCCGCTGGTGAGGAAACTCGCTGTGTTCGCCAAGTACGCTGTTCTGCCGGCAGCCATGGCCGCTGCTCTCCTTTACTCTCCTCCCGATTA
CGATCATCATCTAGATGACCAGCCATTTAATGGGCATATTAGACCGTCTGATCATGTAGGCTTGCATTTGCAGAGTTGTATTCCTCTCATGTTGATAATGAATGCATGGA
AACAAGAGGATGGTGGAATACAATTCCAACTTAGCCGGGAATGGGTTGGGGACAAAACAACGAAGGATGAGGGAGTTGGAGAGTTTTGGGTGTAA
Protein sequenceShow/hide protein sequence
MALMRGEPLVRKLAVFAKYAVLPAAMAAALLYSPPDYDHHLDDQPFNGHIRPSDHVGLHLQSCIPLMLIMNAWKQEDGGIQFQLSREWVGDKTTKDEGVGEFWV