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Carg08609 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08609
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate embryogenesis abundant protein group 8 protein
Genome locationCarg_Chr09:137432..137713
RNA-Seq ExpressionCarg08609
SyntenyCarg08609
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]2.2e-2879.07Show/hide
Query:  EQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLL
        E+Q Q Q++ + EEK  VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSG+PEV+P TID VT  GL+
Subjt:  EQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLL

KAE8649966.1 hypothetical protein Csa_012992 [Cucumis sativus]4.2e-2776.09Show/hide
Query:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLL
        MSN EE  Q Q Q++ + EEK  VE+LLPLESSPYVKYKDLEEYKRKGYG EGHL PKPNQGGGTDAPTLSGSG PEV+P TID VT  GL+
Subjt:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLL

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]1.9e-2774Show/hide
Query:  MSNSEEEQQQQQQ-----LVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQ---GGGTDAPTLSGSGFPEVKPATIDFVTNHGLL
        MS SEE+ Q Q Q     + + +EEK SVEELLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQ   GGGTDAPTLSG+GFPEVKP+TID  TN GL+
Subjt:  MSNSEEEQQQQQQ-----LVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQ---GGGTDAPTLSGSGFPEVKPATIDFVTNHGLL

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]1.3e-41100Show/hide
Query:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS
        MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS
Subjt:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]1.1e-4098.92Show/hide
Query:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS
        MSNSEEEQQQQQQLVREKEEK SVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS
Subjt:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein2.2e-2680.77Show/hide
Query:  VREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLL
        +R  EEK  VE+LLPLESSPYVKYKDLEEYKRKGYG EGHL PKPNQGGGTDAPTLSGSG PEV+P TID VT  GL+
Subjt:  VREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLL

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein1.1e-2879.07Show/hide
Query:  EQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLL
        E+Q Q Q++ + EEK  VE+LLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSG+PEV+P TID VT  GL+
Subjt:  EQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLL

A0A6J1C2A9 uncharacterized protein LOC1110076219.1e-2874Show/hide
Query:  MSNSEEEQQQQQQ-----LVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQ---GGGTDAPTLSGSGFPEVKPATIDFVTNHGLL
        MS SEE+ Q Q Q     + + +EEK SVEELLPLESSPYVKYKDLEEYKR+GYGAEGHLEPKPNQ   GGGTDAPTLSG+GFPEVKP+TID  TN GL+
Subjt:  MSNSEEEQQQQQQ-----LVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQ---GGGTDAPTLSGSGFPEVKPATIDFVTNHGLL

A0A6J1FA12 uncharacterized protein LOC1114436396.5e-42100Show/hide
Query:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS
        MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS
Subjt:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS

A0A7J7C4J8 Uncharacterized protein8.0e-1656.99Show/hide
Query:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQ--GGGTDAPTLSGSGFPEVKPATIDFVTNHGL
        MSN  E+  Q+ +  RE+++K+SV E LP+ESSPYVKY +LE+YKRK YG EGHL   PNQ  GGGTDAPT+SGSG  + K A +D    HG+
Subjt:  MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQ--GGGTDAPTLSGSGFPEVKPATIDFVTNHGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 61.4e-0748.48Show/hide
Query:  QQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGG-TDAPTLSG
        + Q++    E+E K+   + L    +PY+ Y +LE+YK KGYGA+GH EPK   GGG TDAPT SG
Subjt:  QQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGG-TDAPTLSG

AT2G23110.2 Late embryogenesis abundant protein, group 61.4e-0748.48Show/hide
Query:  QQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGG-TDAPTLSG
        + Q++    E+E K+   + L    +PY+ Y +LE+YK KGYGA+GH EPK   GGG TDAPT SG
Subjt:  QQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGG-TDAPTLSG

AT2G23120.1 Late embryogenesis abundant protein, group 61.1e-0654.39Show/hide
Query:  EKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGG-TDAPTLSG
        EK+ +   +  LP + SPY+    LE+YK K YGAEGH EP P  GGG TDAPT SG
Subjt:  EKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGG-TDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 65.9e-1154.39Show/hide
Query:  KDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGG-TDAPTLSGSGFP
        K   ++ LPLE+SPY KY+D+E+YK+  YG  GH + KP  GGG TDAPT SG   P
Subjt:  KDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGG-TDAPTLSGSGFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATAGCGAGGAGGAGCAGCAACAGCAGCAGCAATTGGTGCGGGAGAAGGAAGAGAAGGATTCTGTGGAAGAATTGCTGCCATTGGAGAGCAGTCCGTACGTGAA
ATACAAAGACTTGGAGGAGTACAAAAGAAAAGGGTATGGGGCGGAGGGGCATCTTGAGCCCAAGCCCAACCAGGGCGGCGGTACTGACGCACCCACCTTGTCCGGCAGCG
GCTTCCCGGAGGTGAAGCCCGCCACCATTGACTTCGTCACCAACCATGGCCTTCTCTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATAGCGAGGAGGAGCAGCAACAGCAGCAGCAATTGGTGCGGGAGAAGGAAGAGAAGGATTCTGTGGAAGAATTGCTGCCATTGGAGAGCAGTCCGTACGTGAA
ATACAAAGACTTGGAGGAGTACAAAAGAAAAGGGTATGGGGCGGAGGGGCATCTTGAGCCCAAGCCCAACCAGGGCGGCGGTACTGACGCACCCACCTTGTCCGGCAGCG
GCTTCCCGGAGGTGAAGCCCGCCACCATTGACTTCGTCACCAACCATGGCCTTCTCTCCTGA
Protein sequenceShow/hide protein sequence
MSNSEEEQQQQQQLVREKEEKDSVEELLPLESSPYVKYKDLEEYKRKGYGAEGHLEPKPNQGGGTDAPTLSGSGFPEVKPATIDFVTNHGLLS