; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08613 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08613
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLocalized to the inner membrane of the chloroplast
Genome locationCarg_Chr09:151608..154589
RNA-Seq ExpressionCarg08613
SyntenyCarg08613
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591206.1 hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sororia]1.8e-87100Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

XP_022936063.1 uncharacterized protein LOC111442778 [Cucurbita moschata]4.3e-8196.02Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY       DGGRSSNAGIFVGGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

XP_022975295.1 uncharacterized protein LOC111474436 [Cucurbita maxima]1.1e-7994.89Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY       D GRSSNAGIFVGGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

XP_023535792.1 uncharacterized protein LOC111797119 [Cucurbita pepo subsp. pepo]3.6e-8095.45Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        MAAISNSLVSTKNPQLQLSS SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY       DGGRSSNAGIFVGGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

XP_038900139.1 uncharacterized protein LOC120087268 [Benincasa hispida]3.9e-7488.07Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        M AISNSLV TKNPQLQLS GSNLKTA+K LGSVSPTSLLL PGWVGK KLST RRPLSVQAAY       DGGRSSNAGIF+GGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+DPPNGVAVNSDE+EPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

TrEMBL top hitse value%identityAlignment
A0A1S3BV81 uncharacterized protein LOC1034938443.9e-7284.66Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        M AISNSLV TKNPQLQL+ GSNLKT DK LGS+SPTSL+L+PGWVGKAKLST RRPLSVQAAY       DGGRSSNAGIF+GGFVLGG+IVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKA+AG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLR +DPPNGVAVNSDE+E AI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

A0A6J1FC82 uncharacterized protein LOC1114427782.1e-8196.02Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY       DGGRSSNAGIFVGGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

A0A6J1FTW3 uncharacterized protein LOC1114467943.2e-7487.5Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        M+AISNSL+ TK PQLQLS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSVQAAY       DGGRSS+AGIF+GGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

A0A6J1IGB6 uncharacterized protein LOC1114744365.1e-8094.89Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAY       D GRSSNAGIFVGGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

A0A6J1IT36 uncharacterized protein LOC1114803665.5e-7487.5Show/hide
Query:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY
        M+AISNSLV TK PQLQLS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSVQAAY       DGGRSS+AGIF+GGFVLGGLIVGTLGCVY
Subjt:  MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVY

Query:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
        APQISKALAGTDRK+LMRKLPKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Subjt:  APQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.1.3e-4056Show/hide
Query:  MAAISNSLVS--TKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGC
        MA++S++ +S    + QL  SSG +L    + +      S  LN           ++R L++Q+AY      RD   S + G+FVGGF+LGGLIVG LGC
Subjt:  MAAISNSLVS--TKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGC

Query:  VYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIE
        VYAPQISKA+AG DRK+LMRKLPKFIYDEEKALEKTRKVLA+KI QLNSAID+VSSQL+++D PNG A+++DEIE
Subjt:  VYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIE

AT3G02900.1 unknown protein5.0e-1138.68Show/hide
Query:  STSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDE
        S     LSV A Y      R G +   +  FV GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+
Subjt:  STSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDE

Query:  VSSQLR
        VSS+L+
Subjt:  VSSQLR

AT3G02900.2 unknown protein5.0e-1138.68Show/hide
Query:  STSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDE
        S     LSV A Y      R G +   +  FV GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+
Subjt:  STSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDE

Query:  VSSQLR
        VSS+L+
Subjt:  VSSQLR

AT5G16660.1 unknown protein4.8e-1438.24Show/hide
Query:  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLP
        + L T  KL      + L ++       K S   R  SV A Y      RDG RS ++G F+ GF+LGG + G +  ++APQI +++   + +    K  
Subjt:  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLP

Query:  KFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR
        +  Y +E  LEKTR+ L +KI QLNSAID VSS+LR
Subjt:  KFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR

AT5G16660.2 unknown protein2.6e-1236.76Show/hide
Query:  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLP
        + L T  KL      + L ++       K S   R  SV A         DG RS ++G F+ GF+LGG + G +  ++APQI +++   + +    K  
Subjt:  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLP

Query:  KFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR
        +  Y +E  LEKTR+ L +KI QLNSAID VSS+LR
Subjt:  KFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCAGTTATCATCTGGATCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCTCCCAC
CAGCTTGTTACTCAATCCTGGTTGGGTTGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTACGGAATCGTGATGGCG
GACGGTCAAGCAATGCAGGCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGA
ACAGATCGAAAAGAATTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTC
TGCGATTGATGAGGTTTCTTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCAGTTATCATCTGGATCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCTCCCAC
CAGCTTGTTACTCAATCCTGGTTGGGTTGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTACGGAATCGTGATGGCG
GACGGTCAAGCAATGCAGGCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGA
ACAGATCGAAAAGAATTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTC
TGCGATTGATGAGGTTTCTTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGAAATTTGGTCTTCCTGCACC
GCTCACAACTCTGCGACCTGGAATAATAGTTAATTTTCTCTCTTGAACATTTGAACCCGAGCTTTGATGCTCCATAATGTGTTGTTATGATCGCTCAAATGCTCCATATA
AAGTTTAATAGATTTGTAGAGCAGCATTCCTGCGCCGTGTTTCCTATTTTTTACACGGACAACGGGCTTTGTTTTTGTATTCGGAAGCCACTTATTTCATCCCTTCCGCC
TTCTAGTTGCATTTTATGAATCGTTTAGCATTTTTTGAATTGTTGGCATTGTTGGCATTGTTTCTCAAAATAAGTTTTTGCAA
Protein sequenceShow/hide protein sequence
MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAG
TDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI