| GenBank top hits | e value | %identity | Alignment |
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| KAG6591223.1 Small nuclear ribonucleoprotein SmD3b, partial [Cucurbita argyrosperma subsp. sororia] | 1.6e-64 | 100 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| XP_022151728.1 small nuclear ribonucleoprotein SmD3b-like [Momordica charantia] | 1.8e-63 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGA+PSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| XP_022937091.1 small nuclear ribonucleoprotein SmD3b-like [Cucurbita moschata] | 1.6e-64 | 100 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| XP_022940723.1 small nuclear ribonucleoprotein SmD3b-like isoform X1 [Cucurbita moschata] | 3.6e-64 | 99.24 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| XP_023522400.1 small nuclear ribonucleoprotein SmD3b-like [Cucurbita pepo subsp. pepo] | 4.7e-64 | 99.24 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGATGRG VPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1DDX8 Small nuclear ribonucleoprotein Sm D3 | 8.6e-64 | 98.48 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRG ATGRGA+PSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| A0A6J1F9D0 Small nuclear ribonucleoprotein Sm D3 | 7.8e-65 | 100 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| A0A6J1FQ35 Small nuclear ribonucleoprotein Sm D3 | 1.7e-64 | 99.24 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| A0A6J1IBE9 Small nuclear ribonucleoprotein Sm D3 | 7.8e-65 | 100 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| A0A6J1IVB4 Small nuclear ribonucleoprotein Sm D3 | 1.7e-64 | 99.24 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62318 Small nuclear ribonucleoprotein Sm D3 | 6.8e-34 | 54.26 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGGATGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGGATGRGAVPSARR
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| P62320 Small nuclear ribonucleoprotein Sm D3 | 6.8e-34 | 54.26 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGGATGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGGATGRGAVPSARR
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| P62323 Small nuclear ribonucleoprotein Sm D3 | 6.8e-34 | 54.26 | Show/hide |
Query: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
S+G+P+K+LHEA GH+V+ E +GE+YRG +IE EDN NCQ+ NIT T +DG+V+QLE V+IRGSK+RF+++PDMLKNAPM K + K K G GR
Subjt: SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Query: GRAVAMRAKAQAAGRGGATGRGAVPSARR
G+A ++A+ A GRG GRG + RR
Subjt: GRAVAMRAKAQAAGRGGATGRGAVPSARR
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| Q9LM92 Small nuclear ribonucleoprotein SmD3b | 2.7e-54 | 84.09 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GH+V+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGR AMR K A G GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| Q9S7E6 Small nuclear ribonucleoprotein SmD3a | 2.9e-53 | 83.33 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GH+VSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGR AMRAK G GG GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 1.9e-55 | 84.09 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHEA+GH+V+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQLEHVFIRGSKVRFMVIPD+LK+APMFKRLDARIKGK +SLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGR AMR K A G GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| AT1G76300.1 snRNP core protein SMD3 | 2.1e-54 | 83.33 | Show/hide |
Query: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
MSRSLGIPVKLLHE++GH+VSVE+KSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ASLG
Subjt: MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG
Query: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
VGRGR AMRAK G GG GRGAVP RR
Subjt: VGRGRAVAMRAKAQAAGRGGATGRGAVPSARR
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 1.5e-07 | 28.93 | Show/hide |
Query: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
V+ L + VS+ELK+G + G++ + + N L+ + + K L+H+ +RG+ +R+ ++PD L + R+K K G ++G GRG
Subjt: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK----GASLGVGRG
Query: RAVAMRAKAQAAGRGGATGRG
R GRG GRG
Subjt: RAVAMRAKAQAAGRGGATGRG
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 3.9e-08 | 30.43 | Show/hide |
Query: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG---VGRGR
V+ L + VS+ELK+G + G++ + + N L+ + T K L+H+ +RG+ +R+ ++PD L + RIK K + G GRGR
Subjt: VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLG---VGRGR
Query: AVAMRAKAQAAGRGG
R + + GRGG
Subjt: AVAMRAKAQAAGRGG
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 7.1e-10 | 32.54 | Show/hide |
Query: IPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ ++++ +PD + + ++ R K +G GRGR
Subjt: IPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGR
Query: AVAMRAKAQAAGRGGATGRGAVPSAR
V A GRG T G + R
Subjt: AVAMRAKAQAAGRGGATGRGAVPSAR
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