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Carg08642 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08642
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
Genome locationCarg_Chr09:289970..291883
RNA-Seq ExpressionCarg08642
SyntenyCarg08642
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR044980 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, plant/fungi


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064628.1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 2 [Cucumis melo var. makuwa]2.4e-2190.57Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLYL
        MGGGGHGAGTT+KG+TIH PKRWHTVTGKGLCA+MWFWVLYRAKQDGPVVL+L
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLYL

KAG7024119.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-76100Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLYLFSRCLILVIFVMIRAGDIHGKAMVTMDMITRSFVGLLSMVGRRGYGK
        MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLYLFSRCLILVIFVMIRAGDIHGKAMVTMDMITRSFVGLLSMVGRRGYGK
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLYLFSRCLILVIFVMIRAGDIHGKAMVTMDMITRSFVGLLSMVGRRGYGK

Query:  ASVADPSIENLDRFSSTNGAGVIERVGFGHNFIAVESSHFEGI
        ASVADPSIENLDRFSSTNGAGVIERVGFGHNFIAVESSHFEGI
Subjt:  ASVADPSIENLDRFSSTNGAGVIERVGFGHNFIAVESSHFEGI

XP_004145533.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucumis sativus]3.1e-2196.08Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHGAGTTFKG+TIH PKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

XP_022936519.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita moschata]2.1e-22100Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

XP_038897102.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Benincasa hispida]8.2e-2296.08Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHGAGTT+KGMT+HQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

TrEMBL top hitse value%identityAlignment
A0A0A0L0L4 Uncharacterized protein1.5e-2196.08Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHGAGTTFKG+TIH PKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

A0A1S3BV22 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 24.4e-2192.16Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHGAGTT+KG+TIH PKRWHTVTGKGLCA+MWFWVLYRAKQDGPVVL
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

A0A5A7VAL3 NADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 21.2e-2190.57Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLYL
        MGGGGHGAGTT+KG+TIH PKRWHTVTGKGLCA+MWFWVLYRAKQDGPVVL+L
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLYL

A0A6J1F8I8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 21.0e-22100Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

A0A6J1ILY9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 21.0e-22100Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

SwissProt top hitse value%identityAlignment
Q8LDK3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 21.9e-2182.35Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHG G T+KG+T+H PK WHTVTGKGLCAVMWFW+LYRAKQDGPVV+
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL

Arabidopsis top hitse value%identityAlignment
AT1G76200.1 unknown protein1.3e-2282.35Show/hide
Query:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL
        MGGGGHG G T+KG+T+H PK WHTVTGKGLCAVMWFW+LYRAKQDGPVV+
Subjt:  MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGGTGGGCACGGAGCTGGTACAACTTTCAAGGGCATGACCATACACCAGCCAAAACGCTGGCACACCGTCACCGGCAAGGGATTGTGCGCCGTCATGTGGTT
TTGGGTGCTATACAGGGCGAAACAAGATGGACCTGTAGTACTGTATTTATTTTCTAGATGTCTTATTCTTGTAATATTTGTAATGATTAGGGCTGGAGACATCCATGGGA
AGGCCATGGTGACCATGGACATGATCACTAGGTCCTTTGTAGGGTTGCTGTCAATGGTGGGCAGAAGGGGATATGGCAAAGCTTCAGTTGCAGATCCTTCTATTGAAAAC
TTGGATCGATTCAGTTCAACAAACGGAGCAGGAGTGATTGAAAGGGTTGGATTTGGACACAACTTCATTGCAGTTGAGAGCTCTCATTTTGAAGGCATCTGA
mRNA sequenceShow/hide mRNA sequence
TAATCCAAGTTTTCATCTTCCTCCTTCGATCATTTCTGCAATCAGATTTTGCTGGTCAATTGAAAGTGCAGAGGCCAATATGGGAGGTGGTGGGCACGGAGCTGGTACAA
CTTTCAAGGGCATGACCATACACCAGCCAAAACGCTGGCACACCGTCACCGGCAAGGGATTGTGCGCCGTCATGTGGTTTTGGGTGCTATACAGGGCGAAACAAGATGGA
CCTGTAGTACTGTATTTATTTTCTAGATGTCTTATTCTTGTAATATTTGTAATGATTAGGGCTGGAGACATCCATGGGAAGGCCATGGTGACCATGGACATGATCACTAG
GTCCTTTGTAGGGTTGCTGTCAATGGTGGGCAGAAGGGGATATGGCAAAGCTTCAGTTGCAGATCCTTCTATTGAAAACTTGGATCGATTCAGTTCAACAAACGGAGCAG
GAGTGATTGAAAGGGTTGGATTTGGACACAACTTCATTGCAGTTGAGAGCTCTCATTTTGAAGGCATCTGA
Protein sequenceShow/hide protein sequence
MGGGGHGAGTTFKGMTIHQPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLYLFSRCLILVIFVMIRAGDIHGKAMVTMDMITRSFVGLLSMVGRRGYGKASVADPSIEN
LDRFSSTNGAGVIERVGFGHNFIAVESSHFEGI