; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08658 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08658
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLYR motif-containing protein 2
Genome locationCarg_Chr09:363647..364051
RNA-Seq ExpressionCarg08658
SyntenyCarg08658
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591251.1 LYR motif-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3398.78Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREEL HTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
KAG7024135.1 LYR motif-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-34100Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
XP_022936861.1 uncharacterized protein LOC111443321 [Cucurbita moschata]1.3e-3296.34Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREEL HTIRQEMENNR CSDRQKVRFLLSEG+ERLKRLDEMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
XP_022975831.1 uncharacterized protein LOC111476418 [Cucurbita maxima]1.0e-3296.34Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREEL HTIRQEMENNRSCSDRQK+RFLLSEG ERLKRLDEMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
XP_023535371.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]4.5e-3397.56Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREEL HTIRQEMENNRSCSDRQKVRFLLSEG+ERLKRLDEMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112184.3e-2985.37Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        MV++LDL EFILRARVLKL+RQALRT RKAPVHAREEL HTIRQEMENNRSC+D+QKVR+L+SEG+E LKRLDEMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
A0A6J1F8N3 uncharacterized protein LOC1114433216.4e-3396.34Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREEL HTIRQEMENNR CSDRQKVRFLLSEG+ERLKRLDEMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
A0A6J1FM54 uncharacterized protein LOC1114464662.8e-2886.42Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGH
        MVL+LDLQEFILRARVLKLYR ALRT +KAPVHAREEL HTIRQEMENNR C++RQKVRFLLSEG+ERLKRL+EMLDMQG+
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGH
A0A6J1IFA5 uncharacterized protein LOC1114764184.9e-3396.34Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREEL HTIRQEMENNRSCSDRQK+RFLLSEG ERLKRLDEMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
W9RMC8 Uncharacterized protein2.0e-2679.27Show/hide
Query:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
        M L+ DLQ+FILRARVLKLYRQALRTTR+APVHAR EL  TIRQEMENNR+C+D+QK+RF +SEG+ERLK L EMLDMQGHS
Subjt:  MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS
SwissProt top hitse value%identityAlignment
Q8R033 LYR motif-containing protein 27.8e-0435.14Show/hide
Query:  ALDLQEFILRARVLKLYRQALRTTRKAPVHA-REELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEML
        AL L++F+ R +VL LYR+ LR  R+ P  + R+ L    R+E + N+S ++   +R ++++G  +LK L+  L
Subjt:  ALDLQEFILRARVLKLYRQALRTTRKAPVHA-REELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEML
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein5.7e-2670Show/hide
Query:  VLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGH
        ++ LDLQ FILRARVLKLYRQAL+   +APVH R EL  T+RQEME NR C+D+QK+R+L+SEG+ER+K LDEMLDMQGH
Subjt:  VLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCGCCCTTGATTTACAGGAATTTATTCTCCGGGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTACTCGCAAAGCTCCTGTTCACGCTCGAGAAGA
ACTGAGCCATACGATCAGACAAGAAATGGAAAACAACCGGAGCTGCAGTGATAGACAGAAGGTTAGATTTCTGCTCAGTGAGGGAATGGAGAGATTAAAGCGTTTAGATG
AGATGTTGGATATGCAGGGCCATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTCGCCCTTGATTTACAGGAATTTATTCTCCGGGCAAGAGTGTTGAAACTGTATAGGCAGGCTTTAAGAACTACTCGCAAAGCTCCTGTTCACGCTCGAGAAGA
ACTGAGCCATACGATCAGACAAGAAATGGAAAACAACCGGAGCTGCAGTGATAGACAGAAGGTTAGATTTCTGCTCAGTGAGGGAATGGAGAGATTAAAGCGTTTAGATG
AGATGTTGGATATGCAGGGCCATTCATAA
Protein sequenceShow/hide protein sequence
MVLALDLQEFILRARVLKLYRQALRTTRKAPVHAREELSHTIRQEMENNRSCSDRQKVRFLLSEGMERLKRLDEMLDMQGHS