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Carg08681 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08681
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:474144..474365
RNA-Seq ExpressionCarg08681
SyntenyCarg08681
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3446772.1 hypothetical protein FNV43_RR11952 [Rhamnella rubrinervis]1.8e-1766.23Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVSSRQRTT---------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MKLF+R RK+L+R +F+LPSR SS    T          D+ +DPPKTSCSSYYSSHSHY+EAIADCIEFFNKSSQD
Subjt:  MKLFHRIRKILVRFVFSLPSRVSSRQRTT---------YDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

KAG7024157.1 hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-32100Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDPNTLV
        MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDPNTLV
Subjt:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDPNTLV

KGN60030.1 hypothetical protein Csa_001336 [Cucumis sativus]3.4e-2487.14Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MKLF RIRK+LVRFVFS+PSRV  SSR+RT+YDK +DPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
Subjt:  MKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

KYP64765.1 hypothetical protein KK1_019371 [Cajanus cajan]6.2e-1873.53Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MKLF R RKIL+RFVFS+PSR SS  R      ++PPKTSCSSYYSS+SHY+EAIADCIEFFNKS+QD
Subjt:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

XP_020218596.2 uncharacterized protein LOC109801863 [Cajanus cajan]6.2e-1873.53Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MKLF R RKIL+RFVFS+PSR SS  R      ++PPKTSCSSYYSS+SHY+EAIADCIEFFNKS+QD
Subjt:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

TrEMBL top hitse value%identityAlignment
A0A0A0LDK4 Uncharacterized protein1.7e-2487.14Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MKLF RIRK+LVRFVFS+PSRV  SSR+RT+YDK +DPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
Subjt:  MKLFHRIRKILVRFVFSLPSRV--SSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

A0A151TCL3 Uncharacterized protein3.0e-1873.53Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MKLF R RKIL+RFVFS+PSR SS  R      ++PPKTSCSSYYSS+SHY+EAIADCIEFFNKS+QD
Subjt:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

A0A371F207 Uncharacterized protein (Fragment)1.5e-1772.06Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MKLF R RKIL+R VFS+PSR SS  R      ++PPKTSCSSYYSS+SHY+EAIADCIEFFNKS+QD
Subjt:  MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

A0A6A4PF73 Uncharacterized protein4.4e-1765.75Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVS-----SRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MK+FHR RK+L+R VF++PS  S     SRQR ++D+ ++PPKTSCSSYYSS+SHY+EAI+DCIEFFNKS+QD
Subjt:  MKLFHRIRKILVRFVFSLPSRVS-----SRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

A0A6A5NSA5 Uncharacterized protein4.4e-1765.75Show/hide
Query:  MKLFHRIRKILVRFVFSLPSRVS-----SRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD
        MK+FHR RK+L+R VF++PS  S     SRQR ++D+ ++PPKTSCSSYYSS+SHY+EAI+DCIEFFNKS+QD
Subjt:  MKLFHRIRKILVRFVFSLPSRVS-----SRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75717.1 unknown protein4.9e-1356.94Show/hide
Query:  MKLFHRIRKILVRFV-FSLPS----RVSSRQRTTYDKLYDPPKTSC-SSYYSSHSHYDEAIADCIEFFNKSS
        MKLFH++ KIL+R + F+L S    +  +  R+   + ++PPK SC SSYYSSH HY EAIADCIEFFNKSS
Subjt:  MKLFHRIRKILVRFV-FSLPS----RVSSRQRTTYDKLYDPPKTSC-SSYYSSHSHYDEAIADCIEFFNKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCTTTCATCGAATCCGTAAGATACTCGTTCGCTTTGTGTTCTCACTCCCGTCTCGTGTGTCGTCGAGACAAAGAACAACCTACGACAAGTTGTATGATCCCCC
GAAAACGTCATGCAGCTCCTATTACTCTTCGCACTCCCACTACGATGAGGCCATTGCTGATTGTATTGAGTTCTTCAACAAATCGTCCCAAGATCCAAACACTTTGGTAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCTTTCATCGAATCCGTAAGATACTCGTTCGCTTTGTGTTCTCACTCCCGTCTCGTGTGTCGTCGAGACAAAGAACAACCTACGACAAGTTGTATGATCCCCC
GAAAACGTCATGCAGCTCCTATTACTCTTCGCACTCCCACTACGATGAGGCCATTGCTGATTGTATTGAGTTCTTCAACAAATCGTCCCAAGATCCAAACACTTTGGTAT
GA
Protein sequenceShow/hide protein sequence
MKLFHRIRKILVRFVFSLPSRVSSRQRTTYDKLYDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQDPNTLV