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Carg08709 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08709
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:604781..608642
RNA-Seq ExpressionCarg08709
SyntenyCarg08709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591299.1 Bifunctional nuclease 1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3578.79Show/hide
Query:  VRHTVDDSCLSRRMSLIGRQFSFKSTWNCAASLPRPYTQNCSIFSELSHLLDDLHRISFADDSDRVFWWDIDFITCCLHYQRGSSTDSTVFCNNEYVSG
        VRHTVDDSCLSRRMSLIGRQFSFKSTWNCAASLP                     RISFADDSDRVFWWDIDFITCCLHYQRGSSTDSTVFCNNEYVSG
Subjt:  VRHTVDDSCLSRRMSLIGRQFSFKSTWNCAASLPRPYTQNCSIFSELSHLLDDLHRISFADDSDRVFWWDIDFITCCLHYQRGSSTDSTVFCNNEYVSG
KAG7024184.1 hypothetical protein SDJN02_12998, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-65100Show/hide
Query:  MQNAIRREVFGLSCLYIVRHTVDDSCLSRRMSLIGRQFSFKSTWNCAASLPRPYTQNCSIFSELSHLLDDLHRISFADDSDRVFWWDIDFITCCLHYQRG
        MQNAIRREVFGLSCLYIVRHTVDDSCLSRRMSLIGRQFSFKSTWNCAASLPRPYTQNCSIFSELSHLLDDLHRISFADDSDRVFWWDIDFITCCLHYQRG
Subjt:  MQNAIRREVFGLSCLYIVRHTVDDSCLSRRMSLIGRQFSFKSTWNCAASLPRPYTQNCSIFSELSHLLDDLHRISFADDSDRVFWWDIDFITCCLHYQRG

Query:  SSTDSTVFCNNEYVSGRPT
        SSTDSTVFCNNEYVSGRPT
Subjt:  SSTDSTVFCNNEYVSGRPT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAATGCGATTCGGCGTGAAGTTTTCGGCCTAAGCTGTCTCTACATCGTACGACATACAGTTGATGATTCTTGTTTATCGCGACGTATGAGTTTGATCGGACGACA
ATTTTCTTTCAAATCAACTTGGAACTGCGCAGCTTCTCTTCCGAGGCCCTACACTCAAAATTGCAGCATATTTTCTGAACTTTCTCACCTTCTTGATGACCTTCACAGGA
TCAGCTTCGCCGATGACAGTGATCGTGTTTTTTGGTGGGATATCGATTTCATCACCTGCTGCTTGCACTACCAACGTGGCAGTTCCACTGACTCTACAGTTTTCTGCAAC
AACGAATATGTGTCAGGAAGGCCGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAATGCGATTCGGCGTGAAGTTTTCGGCCTAAGCTGTCTCTACATCGTACGACATACAGTTGATGATTCTTGTTTATCGCGACGTATGAGTTTGATCGGACGACA
ATTTTCTTTCAAATCAACTTGGAACTGCGCAGCTTCTCTTCCGAGGCCCTACACTCAAAATTGCAGCATATTTTCTGAACTTTCTCACCTTCTTGATGACCTTCACAGGA
TCAGCTTCGCCGATGACAGTGATCGTGTTTTTTGGTGGGATATCGATTTCATCACCTGCTGCTTGCACTACCAACGTGGCAGTTCCACTGACTCTACAGTTTTCTGCAAC
AACGAATATGTGTCAGGAAGGCCGACATAAAGTTTGGTCGAGAACTAAATTCGGTGACATGAAAAATGTTTTTATGTATCCCACCATGCATTTATTGCTGCTGCAGCAAT
ACCCTCCTGCTTATTGGTGAAGTAATTCAAATGGAGGAACAACTTGAGCCGTCTGGTAAGTACAACGTTTTGACGCCTTATCTCACTAAGAAGCTTTACTTTCTATTTTC
TAATATGGTCTATTTTAAAATTTTA
Protein sequenceShow/hide protein sequence
MQNAIRREVFGLSCLYIVRHTVDDSCLSRRMSLIGRQFSFKSTWNCAASLPRPYTQNCSIFSELSHLLDDLHRISFADDSDRVFWWDIDFITCCLHYQRGSSTDSTVFCN
NEYVSGRPT