; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08823 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08823
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlycine cleavage system H protein
Genome locationCarg_Chr02:8993364..8994902
RNA-Seq ExpressionCarg08823
SyntenyCarg08823
Gene Ontology termsGO:0009249 - protein lipoylation (biological process)
GO:0019464 - glycine decarboxylation via glycine cleavage system (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005960 - glycine cleavage complex (cellular component)
InterPro domainsIPR000089 - Biotin/lipoyl attachment
IPR002930 - Glycine cleavage system H-protein
IPR003016 - 2-oxo acid dehydrogenase, lipoyl-binding site
IPR011053 - Single hybrid motif
IPR033753 - Glycine cleavage system H-protein/Simiate


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606235.1 Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5899.16Show/hide
Query:  MWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINS
        MW SSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINS
Subjt:  MWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINS

Query:  PISGEIVEVNPQLKDSPGL
        PISGEIVEVNPQLKDSPGL
Subjt:  PISGEIVEVNPQLKDSPGL

KAG7036177.1 Glycine cleavage system H protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-78100Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGLSHIGHGPTFFTAQRCDLDMLTTSLKGN
        DINSPISGEIVEVNPQLKDSPGLSHIGHGPTFFTAQRCDLDMLTTSLKGN
Subjt:  DINSPISGEIVEVNPQLKDSPGLSHIGHGPTFFTAQRCDLDMLTTSLKGN

XP_022931257.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata]5.1e-5997.56Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVA IGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        DINSPISGEIVEVN QLKDSPGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

XP_022995342.1 glycine cleavage system H protein 3, mitochondrial-like [Cucurbita maxima]1.1e-5897.56Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSSSSKT LSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVA IGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        DINSPISGEIVEVNPQLKDSPGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

XP_023532627.1 glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo]6.1e-6098.37Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVA IGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        DINSPISGEIVEVNPQLKDSPGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

TrEMBL top hitse value%identityAlignment
A0A0A0LI67 Glycine cleavage system H protein5.7e-5691.87Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANAL+LSSSSKTHLSP FS+SRCFSTVLDGLKYASSHEWVKHEG VA +GITDHAQDHLGEVVFVDLPESG+ VSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        DINSPISGEIVEVNPQLK+SPGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

A0A6J1ET51 Glycine cleavage system H protein2.5e-5997.56Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVA IGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        DINSPISGEIVEVN QLKDSPGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

A0A6J1GKG7 Glycine cleavage system H protein2.6e-5692.68Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSS+SKTHLS PFS+SRCFSTVLDGLKYASSHEWVKHEG VA +GITDHAQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        DINSPISGEIVEVNPQLKDSPGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

A0A6J1I8M1 Glycine cleavage system H protein2.6e-5692.68Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSS+SKTHLS PFS+SRCFSTVLDGLKYASSHEWVKHEG VA +GITDHAQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        DINSPISGEIVEVNPQLKDSPGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

A0A6J1JYK8 Glycine cleavage system H protein5.5e-5997.56Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSSSSKT LSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVA IGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        DINSPISGEIVEVNPQLKDSPGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

SwissProt top hitse value%identityAlignment
P16048 Glycine cleavage system H protein, mitochondrial1.2e-5080.49Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANAL+LSSSS+ HLSP FSISRCFS VLDGLKYA SHEWVKHEG VA IGITDHAQDHLGEVVFV+LPE G  V++GK FGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        D+NSPISGE++EVN  L   PGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

P49359 Glycine cleavage system H protein, mitochondrial2.1e-4776.42Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALR+W SSTANALRLSS+++ H SP   +SRCFS+VLDGLKYA+SHEWVKHEG VA IGITDHAQDHLGEVVFVDLPE+G  V++   FGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        D+NSPISGEIVEVN +L ++PGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

P49360 Glycine cleavage system H protein, mitochondrial (Fragment)1.2e-4776.42Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSS+++ H SP   +SRCFS+VLDGLKYA+SHEWVKHEG VA +GITDHAQDHLGEVVFVDLPE+G  V++   FGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        D+NSPISGEIVEVN +L ++PGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

Q39732 Glycine cleavage system H protein, mitochondrial7.2e-4877.24Show/hide
Query:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS
        MALRMW SSTANALRLSS+++ H SP   +SRCFS+VLDGLKYA+SHEWVKHEG VA IGITDHAQDHLGEVVFVDLPE+G  V++   FGAVESVKATS
Subjt:  MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATS

Query:  DINSPISGEIVEVNPQLKDSPGL
        D+NSPISGEIVEVN +L ++PGL
Subjt:  DINSPISGEIVEVNPQLKDSPGL

Q9LQL0 Glycine cleavage system H protein 3, mitochondrial2.5e-4879.03Show/hide
Query:  MALRMWVSSTANALRLSSS-SKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKAT
        MALRMW SSTANAL+LSSS SK+HL P FSISRCFS+VL+GLKYA+SHEWVKHEG VA IGITDHAQDHLGEVVFV+LPE+ + VS+ KSFGAVESVKAT
Subjt:  MALRMWVSSTANALRLSSS-SKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKAT

Query:  SDINSPISGEIVEVNPQLKDSPGL
        S+I SPISGE++EVN +L +SPGL
Subjt:  SDINSPISGEIVEVNPQLKDSPGL

Arabidopsis top hitse value%identityAlignment
AT1G32470.1 Single hybrid motif superfamily protein1.8e-4979.03Show/hide
Query:  MALRMWVSSTANALRLSSS-SKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKAT
        MALRMW SSTANAL+LSSS SK+HL P FSISRCFS+VL+GLKYA+SHEWVKHEG VA IGITDHAQDHLGEVVFV+LPE+ + VS+ KSFGAVESVKAT
Subjt:  MALRMWVSSTANALRLSSS-SKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKAT

Query:  SDINSPISGEIVEVNPQLKDSPGL
        S+I SPISGE++EVN +L +SPGL
Subjt:  SDINSPISGEIVEVNPQLKDSPGL

AT2G35120.1 Single hybrid motif superfamily protein1.5e-3261.29Show/hide
Query:  MALRM-WVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKAT
        MA R+ W S  A+ LR+S + +      FS     S VL  LKYA SHEWVK +G  A  GITDHAQDHLG+VV+V+LP+ G  VSQGKSFGAVESVKAT
Subjt:  MALRM-WVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKAT

Query:  SDINSPISGEIVEVNPQLKDSPGL
        SDINSP+SG++VEVN +L +SPGL
Subjt:  SDINSPISGEIVEVNPQLKDSPGL

AT2G35370.1 glycine decarboxylase complex H7.4e-4879.84Show/hide
Query:  MALRMWVSSTANALRLSSS-SKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKAT
        MALRMW SSTANAL+LSSS SK+HLS PFS SRCFSTVL+GLKYA+SHEWVKHEG VA IGIT HAQDHLGEVVFV+LPE    VS+ KSFGAVESVKAT
Subjt:  MALRMWVSSTANALRLSSS-SKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKAT

Query:  SDINSPISGEIVEVNPQLKDSPGL
        S+I SPISGEI+EVN +L +SPGL
Subjt:  SDINSPISGEIVEVNPQLKDSPGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCAGAATGTGGGTTTCTTCCACTGCTAATGCTCTCAGACTCTCTTCTTCATCCAAAACCCATCTCTCTCCTCCATTTTCTATCTCCAGATGCTTTTCTACTGT
TTTGGATGGACTGAAGTATGCTTCTTCACATGAGTGGGTGAAACATGAGGGCCCTGTTGCTGCCATTGGCATCACTGACCATGCTCAGGACCATCTGGGAGAAGTGGTGT
TCGTGGATCTGCCAGAATCAGGAGCTCCGGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTAAAAGCAACCAGTGATATCAACTCCCCAATCTCTGGTGAGATT
GTTGAAGTTAATCCACAGCTGAAGGATTCACCTGGTTTGTCCCACATCGGCCACGGTCCTACATTTTTTACCGCGCAGCGTTGTGATCTTGACATGCTCACGACCAGCCT
TAAGGGGAATTAA
mRNA sequenceShow/hide mRNA sequence
GCTAAAAATTAGAGGTCATTATGAGGCCATAACTCTTACAGATGAGGATATGGAAGGAAAAAGTGGGAATTTCACTGGAAGAAATAAGAAGGCAGTGTTTAGATGAGGCA
CTCACTGCCCACCATCCGTCGAAGATAAACCAACAATGTCGTAAAACTCAAGTTTTCAAAACTTCCTTTCATTTCTTTGCTCATTGCTGATAGCATACCAAAGCAGAGGA
AGAACAAGAACAAGAAGAACAGACCCAAAATAAACAACAAAACTATGGCTCTCAGAATGTGGGTTTCTTCCACTGCTAATGCTCTCAGACTCTCTTCTTCATCCAAAACC
CATCTCTCTCCTCCATTTTCTATCTCCAGATGCTTTTCTACTGTTTTGGATGGACTGAAGTATGCTTCTTCACATGAGTGGGTGAAACATGAGGGCCCTGTTGCTGCCAT
TGGCATCACTGACCATGCTCAGGACCATCTGGGAGAAGTGGTGTTCGTGGATCTGCCAGAATCAGGAGCTCCGGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTG
TAAAAGCAACCAGTGATATCAACTCCCCAATCTCTGGTGAGATTGTTGAAGTTAATCCACAGCTGAAGGATTCACCTGGTTTGTCCCACATCGGCCACGGTCCTACATTT
TTTACCGCGCAGCGTTGTGATCTTGACATGCTCACGACCAGCCTTAAGGGGAATTAA
Protein sequenceShow/hide protein sequence
MALRMWVSSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEI
VEVNPQLKDSPGLSHIGHGPTFFTAQRCDLDMLTTSLKGN