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Carg08829 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08829
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFerredoxin
Genome locationCarg_Chr02:9023828..9025965
RNA-Seq ExpressionCarg08829
SyntenyCarg08829
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606242.1 AP-2 complex subunit mu, partial [Cucurbita argyrosperma subsp. sororia]5.0e-7097.89Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

KAG7036183.1 hypothetical protein SDJN02_02984, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-109100Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLLDSRLDFSWGVCTSLRRYIGFNLEDILPGGQLKEMTMLWSWLWLMSKLLIPEDLWTET
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLLDSRLDFSWGVCTSLRRYIGFNLEDILPGGQLKEMTMLWSWLWLMSKLLIPEDLWTET
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLLDSRLDFSWGVCTSLRRYIGFNLEDILPGGQLKEMTMLWSWLWLMSKLLIPEDLWTET

XP_022930965.1 uncharacterized protein LOC111437299 [Cucurbita moschata]5.0e-7097.89Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

XP_022996089.1 uncharacterized protein LOC111491407 [Cucurbita maxima]4.4e-6694.37Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLP TSFRSVNLKPESSRSFLSTNRNRRFSDLLKCR K ISTELQA VDVAGRTD+GSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

XP_038888790.1 ferredoxin C 2, chloroplastic [Benincasa hispida]2.9e-6591.55Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSF SVNLKPES R FLSTNRNRRFSD+LKCRRKT STELQA VDVA RTDDGS SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

TrEMBL top hitse value%identityAlignment
A0A6J1DQQ0 Ferredoxin6.4e-6389.44Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K E SR FLS NRNRRFSDLLKCRRKT STELQA +DVAGRTD+GSASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

A0A6J1ESD7 Ferredoxin2.4e-7097.89Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

A0A6J1GKE0 Ferredoxin3.2e-6288.03Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKP S R F+STNRN RFSD+LKCRRKT S ELQA VDVA +T++GS SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

A0A6J1I4R5 Ferredoxin2.4e-6288.03Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKP S R F+STNRN RFSD+LKCRRKT S ELQA VDVA +TD+GS SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELK+K   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

A0A6J1K5R4 Ferredoxin2.1e-6694.37Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLP TSFRSVNLKPESSRSFLSTNRNRRFSDLLKCR K ISTELQA VDVAGRTD+GSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

SwissProt top hitse value%identityAlignment
P00253 Ferredoxin8.8e-0944.26Show/hide
Query:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE +   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

P0A3C7 Ferredoxin-13.9e-0945.9Show/hide
Query:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

P0A3C8 Ferredoxin-13.9e-0945.9Show/hide
Query:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

P15788 Ferredoxin6.7e-0944.26Show/hide
Query:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        ++KVT+ + E G+     VP+D+YIL  AE + I LP++CR G C++CA +IK G+I Q +
Subjt:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

Q9C7Y4 Ferredoxin C 2, chloroplastic2.6e-3757.04Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+  +D GS  +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+IS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVR+KSG++RQP+ALGISAELKS+   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 12.1e-0539.29Show/hide
Query:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPL
        ED Y+L  AE   + LP++CR G C+SCA ++ SG I Q +   +  E  S+   L
Subjt:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPL

AT1G32550.1 2Fe-2S ferredoxin-like superfamily protein1.9e-3857.04Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+  +D GS  +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+IS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL
        LPFACRHGCCTSCAVR+KSG++RQP+ALGISAELKS+   LL
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLL

AT1G32550.2 2Fe-2S ferredoxin-like superfamily protein2.3e-3655.94Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+  +D GS  +P+HKVTVHDR+RGVVHEF   EDQYILH+AE+Q+IS
Subjt:  MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLLD
        LPFACRHGCCTSCAVR+KSG++RQP+ALGISAELKS+ I  LD
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIPLLD

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein6.0e-0543.9Show/hide
Query:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        +D Y+L  AE   I LP++CR G C+SCA ++ SG + Q +
Subjt:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

AT2G27510.1 ferredoxin 34.9e-0746Show/hide
Query:  GVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        G   EF V +DQYIL  AE   + LP++CR G C++CA +I SG + Q +
Subjt:  GVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTCAAGCCGGAATCCTCCCGAAGTTTCCTTTCGACGAATCGAAACCGTCGCTTTTCCGACCTCTTGAA
ATGTCGCCGAAAAACGATCTCGACTGAGCTGCAGGCTACTGTTGACGTCGCCGGCAGGACCGACGACGGTTCTGCTTCGATTCCGACTCATAAGGTTACTGTTCATGATA
GAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATTTCCCTTCCTTTTGCTTGCAGGCACGGTTGTTGT
ACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTTGGAATATCTGCCGAGTTGAAATCAAAGGCAATTCCTTTACTTGATTCTAGACTTGA
TTTTTCATGGGGGGTATGCACTTCTTTGCGTAGGTATATTGGCTTCAATTTGGAAGATATTTTGCCCGGGGGCCAATTGAAAGAGATGACTATGCTCTGGAGTTGGCTAT
GGCTGATGAGTAAACTATTGATCCCGGAGGATCTATGGACTGAGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTCAAGCCGGAATCCTCCCGAAGTTTCCTTTCGACGAATCGAAACCGTCGCTTTTCCGACCTCTTGAA
ATGTCGCCGAAAAACGATCTCGACTGAGCTGCAGGCTACTGTTGACGTCGCCGGCAGGACCGACGACGGTTCTGCTTCGATTCCGACTCATAAGGTTACTGTTCATGATA
GAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATTTCCCTTCCTTTTGCTTGCAGGCACGGTTGTTGT
ACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTTGGAATATCTGCCGAGTTGAAATCAAAGGCAATTCCTTTACTTGATTCTAGACTTGA
TTTTTCATGGGGGGTATGCACTTCTTTGCGTAGGTATATTGGCTTCAATTTGGAAGATATTTTGCCCGGGGGCCAATTGAAAGAGATGACTATGCTCTGGAGTTGGCTAT
GGCTGATGAGTAAACTATTGATCCCGGAGGATCTATGGACTGAGACATGA
Protein sequenceShow/hide protein sequence
MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCC
TSCAVRIKSGQIRQPEALGISAELKSKAIPLLDSRLDFSWGVCTSLRRYIGFNLEDILPGGQLKEMTMLWSWLWLMSKLLIPEDLWTET