; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08837 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08837
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMicrospore-specific promoter 2, putative
Genome locationCarg_Chr02:9062268..9063405
RNA-Seq ExpressionCarg08837
SyntenyCarg08837
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606250.1 hypothetical protein SDJN03_03567, partial [Cucurbita argyrosperma subsp. sororia]5.0e-10298.48Show/hide
Query:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
        MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
Subjt:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS

Query:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
        TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPK QLGKTRSGKDEGGSCKNVKKGIPPKWLHLRM  C
Subjt:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC

XP_022930921.1 uncharacterized protein LOC111437264 [Cucurbita moschata]1.8e-104100Show/hide
Query:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
        MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
Subjt:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS

Query:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
        TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
Subjt:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC

XP_022996286.1 uncharacterized protein LOC111491560 [Cucurbita maxima]3.4e-10398.99Show/hide
Query:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
        MEDYAKL PHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
Subjt:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS

Query:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
        TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEK QTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
Subjt:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC

XP_023532991.1 uncharacterized protein LOC111795001 [Cucurbita pepo subsp. pepo]6.9e-10499.49Show/hide
Query:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
        MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
Subjt:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS

Query:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
        TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEK QTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
Subjt:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC

XP_023532992.1 uncharacterized protein LOC111795003 [Cucurbita pepo subsp. pepo]5.3e-72100Show/hide
Query:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
        MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
Subjt:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS

Query:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQ
        TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQ
Subjt:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQ

TrEMBL top hitse value%identityAlignment
A0A0A0LEC6 Uncharacterized protein6.8e-5765.57Show/hide
Query:  EDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERV-------GGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSN
        +D  KL PH  +HSSSSSSMTLFSRLD++D VMK LEKKQRLER+        G+  + IS+DVALKDTY KGSLLDRVA+LEHRL QLCLEM+SGSSSN
Subjt:  EDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERV-------GGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSN

Query:  PSSL-GSTQTSADIS-SSSPTPKQFCRGE-PSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQ--LGKTRSGKDEGGSCKNVKKGIPP-
        PSSL  S+QTS+ +  +SS +PK+FC G+  SSSYP FHYP++G TS++SQ QEK   QR +QKKKQQS PK Q  +GKT + KDE GSCKNVKKG  P 
Subjt:  PSSL-GSTQTSADIS-SSSPTPKQFCRGE-PSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQ--LGKTRSGKDEGGSCKNVKKGIPP-

Query:  --KWLHLRMFGC
          KW HLRMFGC
Subjt:  --KWLHLRMFGC

A0A5D3E4W5 Uncharacterized protein4.2e-3868.18Show/hide
Query:  KCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDS-GSSSNPSSL-GSTQTSADISSSSPTPKQFCRGEPS--SSYPIFHYPSHGGTSKISQIQEKA
        + IS+DVALKDTYFKGSLLDRVA+LEHRL QLCLEM+S GSSSNPSSL  S+QTS +I +SS +PK FC G+ S  SSYP FHYP++G TS+ISQ QEK 
Subjt:  KCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDS-GSSSNPSSL-GSTQTSADISSSSPTPKQFCRGEPS--SSYPIFHYPSHGGTSKISQIQEKA

Query:  QTQRHEQKKKQQSPPKRQ--LGKTRSGKDEG-GSCKNVKKGIPP-KWLHLRMFG
          QR +QKKKQQS PK Q  + KT + KDE  GSCKNVKKG P  KW HLR+FG
Subjt:  QTQRHEQKKKQQSPPKRQ--LGKTRSGKDEG-GSCKNVKKGIPP-KWLHLRMFG

A0A6J1DZI5 uncharacterized protein LOC1110260522.2e-7178.5Show/hide
Query:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
        MED AK L H PQH SSSSSMTL SRLD++D VMKYLE+KQ LER      +C+SLDVALKDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  S
Subjt:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS

Query:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSG-KDEGGSCKNVKKGI-PPKWLHLRMFGC
        T+ S +ISSSS +PKQFCRGEPSSSYP FHYPSHGGTS+ISQ+QEK   QRH+QKKKQ SP K QLGKTRSG KDEGGSCKNVKKGI PPKW HLRMFGC
Subjt:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSG-KDEGGSCKNVKKGI-PPKWLHLRMFGC

A0A6J1ES90 uncharacterized protein LOC1114372648.8e-105100Show/hide
Query:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
        MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
Subjt:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS

Query:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
        TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
Subjt:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC

A0A6J1K4A8 uncharacterized protein LOC1114915601.7e-10398.99Show/hide
Query:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
        MEDYAKL PHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS
Subjt:  MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGS

Query:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
        TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEK QTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC
Subjt:  TQTSADISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G46795.1 microspore-specific promoter 22.6e-1632.99Show/hide
Query:  QHSSSSSSMTLFSRLDYMDLVMKYLEKKQRL----ERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGSTQTSA---
        Q   S SS+ + SRL+++D V+K LE++Q L    +      +  I    A+++ YFKGSLLDR+A+LE RLFQ+CLE++S S S+ S+ GS +TS+   
Subjt:  QHSSSSSSMTLFSRLDYMDLVMKYLEKKQRL----ERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGSTQTSA---

Query:  --DISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGI--PPKWLHLRMFGC
          D++ + P          SS+   FH P       + +++EK + ++ E+   ++   +++  KT+   D   +CK  KK    P KW    + GC
Subjt:  --DISSSSPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGI--PPKWLHLRMFGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTATGCAAAGCTATTACCCCATCATCCACAACATTCCTCATCTTCTTCCTCAATGACCCTTTTTTCCAGATTAGATTACATGGATTTGGTTATGAAGTATTT
GGAGAAAAAACAGAGGTTGGAAAGAGTGGGAGGCGTGGAAAAGAAGTGCATATCTTTGGATGTTGCACTAAAAGATACTTACTTTAAAGGTTCATTGTTGGATCGAGTGG
CATCTCTTGAGCACAGACTTTTCCAGCTATGTTTGGAGATGGATTCAGGCAGCTCCTCAAACCCTTCATCATTAGGTTCAACACAGACATCAGCTGATATCAGTTCATCT
TCTCCAACTCCAAAACAGTTTTGCAGAGGGGAGCCATCGTCTTCATACCCCATATTCCATTATCCCAGCCATGGAGGAACCTCAAAAATATCCCAAATTCAGGAGAAGGC
TCAAACTCAAAGACATGAACAGAAAAAGAAGCAACAGAGTCCTCCAAAAAGGCAACTTGGTAAGACGAGGAGTGGAAAGGATGAAGGAGGATCTTGCAAAAATGTGAAGA
AAGGGATTCCTCCCAAATGGCTACACTTGAGGATGTTTGGTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTATGCAAAGCTATTACCCCATCATCCACAACATTCCTCATCTTCTTCCTCAATGACCCTTTTTTCCAGATTAGATTACATGGATTTGGTTATGAAGTATTT
GGAGAAAAAACAGAGGTTGGAAAGAGTGGGAGGCGTGGAAAAGAAGTGCATATCTTTGGATGTTGCACTAAAAGATACTTACTTTAAAGGTTCATTGTTGGATCGAGTGG
CATCTCTTGAGCACAGACTTTTCCAGCTATGTTTGGAGATGGATTCAGGCAGCTCCTCAAACCCTTCATCATTAGGTTCAACACAGACATCAGCTGATATCAGTTCATCT
TCTCCAACTCCAAAACAGTTTTGCAGAGGGGAGCCATCGTCTTCATACCCCATATTCCATTATCCCAGCCATGGAGGAACCTCAAAAATATCCCAAATTCAGGAGAAGGC
TCAAACTCAAAGACATGAACAGAAAAAGAAGCAACAGAGTCCTCCAAAAAGGCAACTTGGTAAGACGAGGAGTGGAAAGGATGAAGGAGGATCTTGCAAAAATGTGAAGA
AAGGGATTCCTCCCAAATGGCTACACTTGAGGATGTTTGGTTGCTAA
Protein sequenceShow/hide protein sequence
MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVALKDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGSTQTSADISSS
SPTPKQFCRGEPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSGKDEGGSCKNVKKGIPPKWLHLRMFGC