CuGenDBv2

Gene ID	Carg08854
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GTPase
Genome location	Carg_Chr02:9116178..9120127
RNA-Seq Expression	Carg08854
Synteny	Carg08854
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606267.1 hypothetical protein SDJN03_03584, partial [Cucurbita argyrosperma subsp. sororia]

4.6e-108

100

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
        VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

XP_022159442.1 uncharacterized protein LOC111025863 isoform X1 [Momordica charantia]

6.5e-78

77.16

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +QH++IEVG N G+ I + LN+MKPS EI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY+ICGSEA++ NYR G F+ VIREDI+QWMLR+
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

XP_022930989.1 uncharacterized protein LOC111437317 [Cucurbita moschata]

4.4e-103

95.92

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRN EVGNLGSWISRGLNRMK S EIHEPPRGPMKCMKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
        VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY ICGSEA+KMNY  GGFNNVIREDIM+WMLRN
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

XP_022995481.1 uncharacterized protein LOC111491005 [Cucurbita maxima]

3.8e-102

96.46

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG NLGSWISRGLNRMK S EIHEPPRGPMKCMK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAL-KMNYRTGGFNNVIREDIMQWMLRN
        MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA+  MNYR GGFNNVIREDIMQWMLRN
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAL-KMNYRTGGFNNVIREDIMQWMLRN

XP_023533976.1 uncharacterized protein LOC111795664 [Cucurbita pepo subsp. pepo]

4.3e-106

97.96

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRTFK+AMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMK S EIHEPPRGPMKCMKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
        VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA+KMNYRTGGFNNVIREDIMQWMLRN
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DZV3 uncharacterized protein LOC111025863 isoform X1

3.1e-78

77.16

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +QH++IEVG N G+ I + LN+MKPS EI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY+ICGSEA++ NYR G F+ VIREDI+QWMLR+
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

A0A6J1E2E5 uncharacterized protein LOC111025863 isoform X2

1.0e-68

70.92

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR+IFDV VKVHQ +QH++IEVG                             MKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
        +KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQPKPA  GT IQYRQY+ICGSEA++ NYR G F+ VIREDI+QWMLR+
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

A0A6J1ET19 uncharacterized protein LOC111437317

2.2e-103

95.92

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRN EVGNLGSWISRGLNRMK S EIHEPPRGPMKCMKM
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKM

Query:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
        VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQY ICGSEA+KMNY  GGFNNVIREDIM+WMLRN
Subjt:  VKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

A0A6J1HFJ9 uncharacterized protein LOC111463851

1.1e-67

68.02

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK
        MVLWEI LATAYFLGLKRTFKL +K QRRLVSP HPRIR+FL  RTRAIFDVT+K H+ I+HR+I+VG N+ SWIS+ LNR KPS  IH+ P G    MK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN
        M+KQ S+SY+KHR S RA I QK D+Y+S TSSVH WPK FPTIAMIMRQ KPA  GTM Q+RQ++IC SE +K NYR G F + IR+DI QWM+RN
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

A0A6J1K213 uncharacterized protein LOC111491005

1.8e-102

96.46

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK
        MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG NLGSWISRGLNRMK S EIHEPPRGPMKCMK
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAL-KMNYRTGGFNNVIREDIMQWMLRN
        MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA+  MNYR GGFNNVIREDIMQWMLRN
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEAL-KMNYRTGGFNNVIREDIMQWMLRN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32260.1 unknown protein

6.5e-44

49.5

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK
        MV WEITL TAYFLGL+RT++LA+KIQRRLV+PKHP+IRQFL  RTR IFDV + VH+ IQ R+IEVG NLG+WI R L++MKP+ +I   P  P     
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQ-----KFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA--LKMNYRT-GGFNNVIREDIMQ
         + +A       RP      +Q     + D+++  TS  H   KPFP+++M+++ P+P GT T  QYR Y   G  A  ++ +Y T GGFN V+R+DI+Q
Subjt:  MVKQASSSYLKHRPSPRAVISQ-----KFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEA--LKMNYRT-GGFNNVIREDIMQ

Query:  WM
        WM
Subjt:  WM

AT2G35480.1 unknown protein

1.2e-42

45.41

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Query:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK
        MVLWE+ L TAYFLG++RT++LA+K QRRLVSPKHPRIR F+  RT  IFD+ ++VH+ IQ R++ +G NLG+WI RGL+RMKPS ++  P        K
Subjt:  MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVG-NLGSWISRGLNRMKPSTEIHEPPRGPMKCMK

Query:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLR
          +   S+ LK   + +   +++ D+  ++  S+  +   +P  +M+M +P P  TGT  QYR Y++  S  +K  Y  GGFN+VIR+DI+QWM++
Subjt:  MVKQASSSYLKHRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLR

Sequences

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CDS sequence

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mRNA sequence

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ATGGTGTTGTGGGAGATTACATTGGCAACAGCTTATTTCTTGGGGCTAAAGCGAACGTTTAAGCTCGCTATGAAGATTCAGAGACGCCTTGTTTCCCCTAAGCACCCTCG
GATTCGTCAATTTCTGCGCGGACGTACACGCGCCATATTTGATGTTACCGTAAAAGTTCACCAGAGAATTCAGCATCGAAACATAGAAGTTGGTAATCTTGGTAGCTGGA
TTTCACGAGGGCTTAATCGAATGAAACCATCTACTGAGATTCATGAACCTCCAAGGGGGCCTATGAAATGTATGAAAATGGTCAAGCAGGCTTCCAGCTCCTACTTGAAA
CACCGGCCCAGCCCTCGAGCGGTGATTAGTCAGAAATTCGATCAATATATGTCAATTACCTCATCAGTACACAGATGGCCTAAGCCCTTCCCTACCATTGCAATGATCAT
GAGGCAGCCGAAGCCTGCTGGAACTGGGACCATGATCCAATACCGACAATATGCCATTTGTGGCTCTGAAGCATTGAAAATGAATTACAGAACAGGAGGTTTCAACAACG
TTATTAGAGAAGATATTATGCAGTGGATGCTCCGAAATTAGAAGAGAGAATGTTTTCTAGTTGCCCTCTCCTTGGAGATTACAATATTTGGCCGACAATACAGTCTTTAG
TCAAGTGTTTAGCTTCCAATCTTAGATTGTTCCTTCTCTTCTTGATGTAAAATCTTTCTAACATGTTCCTAGGGAAGTTGGAAATCATGTCTATGCGCATGAATAAATTA
GATAGCTAATCCCTAGTATGAAAGAGACCTCTTTGAATCGACATTTTAAGTGCTTAAAAACGCTTTAATACTTTAGAACTCTTAAAAAGTCGTTCCAATAAGTCTATACC
ATAATTACCAAAATGTCCACTTGAAAGTTCATTGAATATACTTCATTTAAGCTGGGTATTGGCTCTGTTTCGTGTCAATAATTTTAATTCATCACTTTGTAAGCTTATT

Protein sequence

Show/hide protein sequence

MVLWEITLATAYFLGLKRTFKLAMKIQRRLVSPKHPRIRQFLRGRTRAIFDVTVKVHQRIQHRNIEVGNLGSWISRGLNRMKPSTEIHEPPRGPMKCMKMVKQASSSYLK
HRPSPRAVISQKFDQYMSITSSVHRWPKPFPTIAMIMRQPKPAGTGTMIQYRQYAICGSEALKMNYRTGGFNNVIREDIMQWMLRN

Carg08854 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome