CuGenDBv2

Gene ID	Carg08871
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	50S ribosomal protein L35
Genome location	Carg_Chr02:9236654..9239342
RNA-Seq Expression	Carg08871
Synteny	Carg08871
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR021137 - Ribosomal protein L35 IPR037229 - Ribosomal protein L35 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7036224.1 hypothetical protein SDJN02_03026 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-84

100

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
        KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]

1.3e-74

89.29

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRS   PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

XP_022931031.1 uncharacterized protein LOC111437349 [Cucurbita moschata]

1.2e-83

99.4

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRS LSPLYAVQVRHVSSRERKKRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
        KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

XP_022996248.1 uncharacterized protein LOC111491530 [Cucurbita maxima]

3.1e-81

97.62

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHS PSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRS LSPLYAVQVRHVSSRERKKRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
        KLKKTKIK YSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

XP_023532529.1 uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]

5.7e-83

98.81

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRS LSPLYAVQVRHVSSRERKKRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
        KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBT5 Uncharacterized protein

7.6e-65

80.84

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLR C+KLRSAAAKPSQI++SVSSTRRIFHSAPSLYQPLHFS NNL+SRSL NAS QTHS LAAYQCIRS   PL  VQVRHVSSR+R+ +RKP TP TS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+P  VPLAYAKVMKKLNFC
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC

A0A1S3CDR4 uncharacterized protein LOC103499252

1.8e-66

82.63

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQIV SVSSTRRIFHSAPSLYQPLHFSPNNL+SRSL NA  QTHS LAAYQCIRS L PL  VQVRHVSSR+R+ +RKP TP TS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+ KDGSIKRR EGKRHNAH KSK++KR+LR+P  VPLAYAKVMKKLNFC
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC

A0A6J1DPB8 uncharacterized protein LOC111023059

6.2e-75

89.29

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRS   PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

A0A6J1ESK5 uncharacterized protein LOC111437349

5.6e-84

99.4

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRS LSPLYAVQVRHVSSRERKKRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
        KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

A0A6J1KAA4 uncharacterized protein LOC111491530

1.5e-81

97.62

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Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS
        MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHS PSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRS LSPLYAVQVRHVSSRERKKRRKPMTPVTS
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTS

Query:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG
        KLKKTKIK YSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G45590.1 Ribosomal protein L35

2.3e-29

48.07

Show/hide

Query:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPN---NLSSRSLLNASLQTHSSLAAYQCIRSPLS-------PLYAVQVRHVSSRER--
        M R+C+KLRS          S+ S R +     S ++ +H SP+   +L++ +L  A+    S + A     S +S       P + VQVR+++S+E+  
Subjt:  MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPN---NLSSRSLLNASLQTHSSLAAYQCIRSPLS-------PLYAVQVRHVSSRER--

Query:  --KKRRKPMTPVTSKLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC
          KK+ +P TP+TSK+KK KIK YSS+K RF    DG+I+R KEGKRHNAHLKSKK+KRRLRQPG VP AYAKVMKKLNFC
Subjt:  --KKRRKPMTPVTSKLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTCAGGTGGTGTTCGAAGCTTCGATCTGCGGCGGCGAAACCATCTCAAATTGTACATAGCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTTTACCA
GCCTCTCCATTTCTCTCCGAATAATTTGAGTTCCAGGTCCCTTCTCAATGCATCTTTACAGACTCATTCTTCACTTGCAGCTTACCAGTGCATTCGATCTCCGCTCTCAC
CTCTCTATGCTGTTCAAGTGCGACATGTTTCGTCAAGAGAGCGAAAGAAGAGGAGAAAGCCGATGACGCCAGTTACTTCCAAATTGAAGAAAACGAAGATAAAATGTTAC
TCGTCTTACAAGTCTAGGTTTTGGGTGAGGAAGGATGGGAGCATTAAACGTAGAAAGGAAGGGAAAAGGCACAATGCTCATTTGAAGTCCAAAAAAGCAAAGCGTAGACT
GAGACAGCCAGGCACTGTCCCATTGGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAA

mRNA sequence

Show/hide mRNA sequence

TCTCTCTTTAACAATTCCCTTTGGTCATACGACGGCGACGACGATGCTCAGGTGGTGTTCGAAGCTTCGATCTGCGGCGGCGAAACCATCTCAAATTGTACATAGCGTTT
CTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTTTACCAGCCTCTCCATTTCTCTCCGAATAATTTGAGTTCCAGGTCCCTTCTCAATGCATCTTTACAGACTCAT
TCTTCACTTGCAGCTTACCAGTGCATTCGATCTCCGCTCTCACCTCTCTATGCTGTTCAAGTGCGACATGTTTCGTCAAGAGAGCGAAAGAAGAGGAGAAAGCCGATGAC
GCCAGTTACTTCCAAATTGAAGAAAACGAAGATAAAATGTTACTCGTCTTACAAGTCTAGGTTTTGGGTGAGGAAGGATGGGAGCATTAAACGTAGAAAGGAAGGGAAAA
GGCACAATGCTCATTTGAAGTCCAAAAAAGCAAAGCGTAGACTGAGACAGCCAGGCACTGTCCCATTGGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAA
ATTATTGGTACAAGTCTCCTGTCGTGCTAGCTTCAAGATCACCATCGAGATATCAGTCCTTGCTCATCTTTTGGATTTTATATTAAGTGCCTTAGAACAAACTAAGAAAA
CAATTATTTCTTCTTTATTTGAAGTTTTGATGATAGAGATGATTGTGATTAAAAACGAGGTGATCTTTCAATTGTCTCCTTGTACCCTGAGTTAACCCCTAACAGTGTCC
AATAATATTTATCTTTCGCATGGGATACGGTCCTACATGTGGCTTGCAATTAGCGATGTCCACGACACGAGGACCTCATCTCTACCTTCCATTTAATTTTCTAT

Protein sequence

Show/hide protein sequence

MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTSKLKKTKIKCY
SSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG

Carg08871 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome