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Carg08876 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08876
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTumor necrosis factor alpha-induced protein like
Genome locationCarg_Chr02:9256627..9258536
RNA-Seq ExpressionCarg08876
SyntenyCarg08876
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606288.1 hypothetical protein SDJN03_03605, partial [Cucurbita argyrosperma subsp. sororia]2.1e-8092.43Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRV AGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE-----------ICKTSITEVSQSFERSTDALRSRFGIPST
         QIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE           +CKTSITEVSQSFERSTDALRSRFGIPST
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE-----------ICKTSITEVSQSFERSTDALRSRFGIPST

KAG7036229.1 hypothetical protein SDJN02_03031, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-84100Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYEICKTSITEVSQSFERSTDALRSRFGIPST
        PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYEICKTSITEVSQSFERSTDALRSRFGIPST
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYEICKTSITEVSQSFERSTDALRSRFGIPST

XP_022931189.1 uncharacterized protein LOC111437446 isoform X1 [Cucurbita moschata]2.3e-6697.93Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRV AGLFKSSSRNISSLFTISDLKD+ASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE
         QIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE

XP_022995633.1 uncharacterized protein LOC111491109 [Cucurbita maxima]3.0e-7182.14Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGKN DRTRRS AAELLETPPLTPPSATDSPKSAIFSRKINGNVSKF SPENTNTAKNRV AGLFKSSSRNISSL TISDLKD+ASSQLHDLKRL DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYEI----------------------CKTSITEVSQSFERSTDALRSRFGIPST
         QIVED+ESSNSRLQKRFKIQSQACQKMMDE E E KKMSQRIYE                       CKTSITEVSQSFERSTDALRSRFGIPST
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYEI----------------------CKTSITEVSQSFERSTDALRSRFGIPST

XP_023532951.1 uncharacterized protein LOC111794964 [Cucurbita pepo subsp. pepo]7.3e-7382.14Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGKN DRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKIN NVSKFSSPENTNTAKNRV A LFKS SRNISSL TISDLKD+ASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE----------------------ICKTSITEVSQSFERSTDALRSRFGIPST
         QIVED+ESSNSRLQKRFKIQSQACQKMMDE EKE KKMSQRIYE                      +CKTSITEVSQSFERS+DALRSRFGIPST
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE----------------------ICKTSITEVSQSFERSTDALRSRFGIPST

TrEMBL top hitse value%identityAlignment
A0A6J1ETM0 uncharacterized protein LOC111437446 isoform X11.1e-6697.93Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRV AGLFKSSSRNISSLFTISDLKD+ASSQLHDLKRLVDHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE
         QIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE

A0A6J1HH77 uncharacterized protein LOC111464038 isoform X22.4e-6172.45Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGK R RTRRSSAAELLETPP TP  ATDSPKSAIF+RKIN N +KFSSPENTN  KNRV AGLFKS SRN SSL TISDLKD A+SQL DLKR +DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE----------------------ICKTSITEVSQSFERSTDALRSRFGIPST
         QI++D ESS SRL+KRFKIQSQACQKMMDE EKE KKMSQRIYE                       CKTS+TE+SQSFERS DALRSRFGIPST
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE----------------------ICKTSITEVSQSFERSTDALRSRFGIPST

A0A6J1HLD9 uncharacterized protein LOC111464038 isoform X13.1e-6172.08Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGK R RTRRSSAAELLETPP TP  ATDSPKSAIF+RKIN N +KFSSPENTN  KNRV AGLFKS SRN SSL TISDLKD A+SQL DLKR +DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE-----------------------ICKTSITEVSQSFERSTDALRSRFGIPST
         QI++D ESS SRL+KRFKIQSQACQKMMDE EKE KKMSQRIYE                        CKTS+TE+SQSFERS DALRSRFGIPST
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE-----------------------ICKTSITEVSQSFERSTDALRSRFGIPST

A0A6J1HRE1 uncharacterized protein LOC1114670964.8e-6272.45Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGK R RTRRSSAAELLETPP TPP ATDSPKSAIF+RKIN N +KFSSPENTN  KNR  AGLFKS SRN SSL TISDLKD A+SQL DLKR +DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE----------------------ICKTSITEVSQSFERSTDALRSRFGIPST
         QI++D ESS SRL+KRFKIQSQACQKMMDE EKE KKMSQRIYE                       CKTS+TE+SQSFERS DALRSRFGIPST
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYE----------------------ICKTSITEVSQSFERSTDALRSRFGIPST

A0A6J1K8J7 uncharacterized protein LOC1114911091.5e-7182.14Show/hide
Query:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH
        MGKN DRTRRS AAELLETPPLTPPSATDSPKSAIFSRKINGNVSKF SPENTNTAKNRV AGLFKSSSRNISSL TISDLKD+ASSQLHDLKRL DHSH
Subjt:  MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSH

Query:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYEI----------------------CKTSITEVSQSFERSTDALRSRFGIPST
         QIVED+ESSNSRLQKRFKIQSQACQKMMDE E E KKMSQRIYE                       CKTSITEVSQSFERSTDALRSRFGIPST
Subjt:  PQIVEDIESSNSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYEI----------------------CKTSITEVSQSFERSTDALRSRFGIPST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAACAGGGATCGAACTCGCCGGTCCTCAGCAGCGGAGCTTCTGGAGACGCCGCCGTTAACGCCTCCTTCGGCTACCGATTCTCCAAAGTCAGCGATCTTCAG
CAGAAAAATTAACGGCAATGTAAGCAAGTTTTCGTCACCGGAGAATACCAACACTGCGAAAAACAGAGTCACCGCTGGTCTCTTTAAGTCGTCTTCTCGAAATATTTCGA
GCTTGTTTACTATATCTGATCTCAAGGATGTTGCGTCTTCACAGCTACACGATCTCAAGCGCCTTGTTGATCACTCTCACCCACAAATCGTTGAAGACATTGAATCCTCA
AACTCGCGCCTCCAAAAGCGATTCAAGATTCAAAGTCAAGCATGCCAGAAAATGATGGATGAAGTAGAGAAGGAGAAAAAGAAGATGTCTCAAAGAATTTATGAAATTTG
CAAAACATCCATAACTGAAGTCTCGCAGTCCTTTGAGAGATCAACTGATGCTCTTCGCAGCCGTTTTGGGATCCCGTCTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAACAGGGATCGAACTCGCCGGTCCTCAGCAGCGGAGCTTCTGGAGACGCCGCCGTTAACGCCTCCTTCGGCTACCGATTCTCCAAAGTCAGCGATCTTCAG
CAGAAAAATTAACGGCAATGTAAGCAAGTTTTCGTCACCGGAGAATACCAACACTGCGAAAAACAGAGTCACCGCTGGTCTCTTTAAGTCGTCTTCTCGAAATATTTCGA
GCTTGTTTACTATATCTGATCTCAAGGATGTTGCGTCTTCACAGCTACACGATCTCAAGCGCCTTGTTGATCACTCTCACCCACAAATCGTTGAAGACATTGAATCCTCA
AACTCGCGCCTCCAAAAGCGATTCAAGATTCAAAGTCAAGCATGCCAGAAAATGATGGATGAAGTAGAGAAGGAGAAAAAGAAGATGTCTCAAAGAATTTATGAAATTTG
CAAAACATCCATAACTGAAGTCTCGCAGTCCTTTGAGAGATCAACTGATGCTCTTCGCAGCCGTTTTGGGATCCCGTCTACCTAA
Protein sequenceShow/hide protein sequence
MGKNRDRTRRSSAAELLETPPLTPPSATDSPKSAIFSRKINGNVSKFSSPENTNTAKNRVTAGLFKSSSRNISSLFTISDLKDVASSQLHDLKRLVDHSHPQIVEDIESS
NSRLQKRFKIQSQACQKMMDEVEKEKKKMSQRIYEICKTSITEVSQSFERSTDALRSRFGIPST