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Carg08885 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08885
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGRAM domain-containing protein
Genome locationCarg_Chr02:9314014..9314514
RNA-Seq ExpressionCarg08885
SyntenyCarg08885
Gene Ontology termsNA
InterPro domainsIPR037848 - GEM-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036238.1 GEM-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-52100Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDRRELGTVEEGSFRDLGGRLPS
        MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDRRELGTVEEGSFRDLGGRLPS
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDRRELGTVEEGSFRDLGGRLPS

XP_008460396.1 PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo]1.5e-2274.36Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI
        M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA  S FPL +  SPGQPQWI
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI

XP_008460398.1 PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]1.5e-2274.36Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI
        M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA  S FPL +  SPGQPQWI
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI

XP_008460399.1 PREDICTED: GEM-like protein 2 isoform X3 [Cucumis melo]1.5e-2274.36Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI
        M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA  S FPL +  SPGQPQWI
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI

XP_023532950.1 GLABRA2 expression modulator-like [Cucurbita pepo subsp. pepo]2.8e-3796.25Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDR
        MVRLHQWAKLLTE DYEKVFQQTFGFTDGDKYLGLCL LNTSSGPVNGTLYISTKMVA YSKFPLRHSSSPGQPQWIHDR
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDR

TrEMBL top hitse value%identityAlignment
A0A1S3CCD7 GEM-like protein 2 isoform X27.3e-2374.36Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI
        M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA  S FPL +  SPGQPQWI
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI

A0A1S3CCH4 GEM-like protein 2 isoform X17.3e-2374.36Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI
        M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA  S FPL +  SPGQPQWI
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI

A0A1S3CCV4 GEM-like protein 2 isoform X37.3e-2374.36Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI
        M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA  S FPL +  SPGQPQWI
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWI

A0A6J1DUB7 GEM-like protein 14.6e-1764.94Show/hide
Query:  RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIH
        RL Q  KL+TEG  EK+FQ TFG   GDKYL    C L+TSSGPVNGTLYISTK VA  S+ PL +SSSPGQP+W++
Subjt:  RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIH

A0A6J1E018 GEM-like protein 29.5e-2363.54Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDR-----RELGTVEEGS
        M RLHQ  KLLTEG YEKVFQQTFGF  GDKY+    C L+TSSGPVNGTLYISTK VA  S+FPL +  SPGQ QWIH +      +LGT+   S
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDR-----RELGTVEEGS

SwissProt top hitse value%identityAlignment
Q8S8F8 GLABRA2 expression modulator2.4e-0741.56Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQW
        M R+ Q  K+  EG YEK+F+QTF     ++ L    C L+TS+GPV G LYIS+  +A  S  PL + +   Q +W
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQW

Q9LYV6 GEM-like protein 59.2e-0737.84Show/hide
Query:  AKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDR
        AK +T+G +E +F+Q FG    +       C L+T++GPV GT+Y+S   VA  S  PL  ++  GQ  W + R
Subjt:  AKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDR

Q9M063 Putative GEM-like protein 34.6e-0645.16Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYS
        M R+ Q  K+L EG YEK+F+QTF     ++      C L+TS+GPV G LY+ST  +A  S
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYS

Q9M122 GEM-like protein 21.3e-0842.47Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPG
        M RL Q  K++ EG  E+VFQ+ FG    +K L   +C ++T+SGPV G +YIS + +A  S + +R  SS G
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPG

Q9SE96 GEM-like protein 16.4e-0846.97Show/hide
Query:  RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRH
        R+ Q  K+L EG YEKVF+QTF     +K L    C L+TS+GPV G +Y+ST  +A  S  PL +
Subjt:  RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRH

Arabidopsis top hitse value%identityAlignment
AT1G28200.1 FH interacting protein 14.5e-0946.97Show/hide
Query:  RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRH
        R+ Q  K+L EG YEKVF+QTF     +K L    C L+TS+GPV G +Y+ST  +A  S  PL +
Subjt:  RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRH

AT2G22475.1 GRAM domain family protein1.7e-0841.56Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQW
        M R+ Q  K+  EG YEK+F+QTF     ++ L    C L+TS+GPV G LYIS+  +A  S  PL + +   Q +W
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQW

AT2G22475.2 GRAM domain family protein1.7e-0841.56Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQW
        M R+ Q  K+  EG YEK+F+QTF     ++ L    C L+TS+GPV G LYIS+  +A  S  PL + +   Q +W
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQW

AT4G01600.1 GRAM domain family protein9.1e-1042.47Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPG
        M RL Q  K++ EG  E+VFQ+ FG    +K L   +C ++T+SGPV G +YIS + +A  S + +R  SS G
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPG

AT4G01600.2 GRAM domain family protein9.1e-1042.47Show/hide
Query:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPG
        M RL Q  K++ EG  E+VFQ+ FG    +K L   +C ++T+SGPV G +YIS + +A  S + +R  SS G
Subjt:  MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGGCTTCATCAATGGGCGAAGTTACTTACAGAAGGTGACTATGAAAAAGTGTTCCAGCAGACGTTTGGTTTTACTGATGGAGACAAATACTTGGGCCTTTGCTT
GTGTCTGAACACTTCCTCTGGGCCTGTAAATGGGACTCTATACATATCCACAAAAATGGTGGCCATCTATAGTAAGTTTCCTCTTCGTCACTCTTCGTCTCCTGGCCAGC
CACAGTGGATCCATGACAGGAGGGAGTTAGGGACCGTAGAAGAGGGATCATTCCGGGACTTAGGAGGGAGATTACCCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGGCTTCATCAATGGGCGAAGTTACTTACAGAAGGTGACTATGAAAAAGTGTTCCAGCAGACGTTTGGTTTTACTGATGGAGACAAATACTTGGGCCTTTGCTT
GTGTCTGAACACTTCCTCTGGGCCTGTAAATGGGACTCTATACATATCCACAAAAATGGTGGCCATCTATAGTAAGTTTCCTCTTCGTCACTCTTCGTCTCCTGGCCAGC
CACAGTGGATCCATGACAGGAGGGAGTTAGGGACCGTAGAAGAGGGATCATTCCGGGACTTAGGAGGGAGATTACCCTCTTAA
Protein sequenceShow/hide protein sequence
MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDRRELGTVEEGSFRDLGGRLPS