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Carg08888 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08888
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:9330145..9330713
RNA-Seq ExpressionCarg08888
SyntenyCarg08888
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571596.1 hypothetical protein SDJN03_28324, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1458.62Show/hide
Query:  MSGEFISEDEKTSRVNGFTRDEQVIMIRNRVLQNKHRSHRRRHRKTDLRRRGSPPQPIARGLERS-PPIRTPLRLIAVARGRNPTGT
        MSGE +SEDEK+  VN  T DE+VIMI N  LQ+  R HRRR R +DLR RGSP QP+ R L+   PP R  LR IA  R RNPTG+
Subjt:  MSGEFISEDEKTSRVNGFTRDEQVIMIRNRVLQNKHRSHRRRHRKTDLRRRGSPPQPIARGLERS-PPIRTPLRLIAVARGRNPTGT

KAG6606303.1 hypothetical protein SDJN03_03620, partial [Cucurbita argyrosperma subsp. sororia]7.9e-51100Show/hide
Query:  MSGEFISEDEKTSRVNGFTRDEQVIMIRNRVLQNKHRSHRRRHRKTDLRRRGSPPQPIARGLERSPPIRTPLRLIAVARGRNPTGTETDRIWWMKWSGFV
        MSGEFISEDEKTSRVNGFTRDEQVIMIRNRVLQNKHRSHRRRHRKTDLRRRGSPPQPIARGLERSPPIRTPLRLIAVARGRNPTGTETDRIWWMKWSGFV
Subjt:  MSGEFISEDEKTSRVNGFTRDEQVIMIRNRVLQNKHRSHRRRHRKTDLRRRGSPPQPIARGLERSPPIRTPLRLIAVARGRNPTGTETDRIWWMKWSGFV

Query:  LKC
        LKC
Subjt:  LKC

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTGAGTTTATAAGCGAGGATGAGAAGACCAGCCGCGTGAATGGTTTCACTCGCGATGAACAAGTAATTATGATTCGTAACCGTGTGCTTCAAAACAAACATCG
CAGCCACCGCCGCCGCCACCGCAAGACCGATCTTCGCCGCCGTGGATCTCCGCCTCAGCCAATCGCCCGCGGCCTGGAACGCTCTCCTCCTATTCGGACGCCTCTTCGAC
TCATCGCCGTCGCTCGTGGTCGGAACCCTACCGGAACCGAAACTGATCGGATTTGGTGGATGAAATGGTCCGGATTTGTTCTTAAATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGTGAGTTTATAAGCGAGGATGAGAAGACCAGCCGCGTGAATGGTTTCACTCGCGATGAACAAGTAATTATGATTCGTAACCGTGTGCTTCAAAACAAACATCG
CAGCCACCGCCGCCGCCACCGCAAGACCGATCTTCGCCGCCGTGGATCTCCGCCTCAGCCAATCGCCCGCGGCCTGGAACGCTCTCCTCCTATTCGGACGCCTCTTCGAC
TCATCGCCGTCGCTCGTGGTCGGAACCCTACCGGAACCGAAACTGATCGGATTTGGTGGATGAAATGGTCCGGATTTGTTCTTAAATGTTGAAAATGCGACGATCTGATG
G
Protein sequenceShow/hide protein sequence
MSGEFISEDEKTSRVNGFTRDEQVIMIRNRVLQNKHRSHRRRHRKTDLRRRGSPPQPIARGLERSPPIRTPLRLIAVARGRNPTGTETDRIWWMKWSGFVLKC