; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08891 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08891
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationCarg_Chr02:9335217..9338546
RNA-Seq ExpressionCarg08891
SyntenyCarg08891
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606306.1 hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia]2.3e-6196.4Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALG     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
        SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL

KAG7036244.1 hypothetical protein SDJN02_03046 [Cucurbita argyrosperma subsp. argyrosperma]8.1e-67100Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
        SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL

XP_022931147.1 uncharacterized protein LOC111437414 [Cucurbita moschata]1.5e-6094.96Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA+G     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
        SLEKVLSIDDIMASIC ERRKKPGKRSRPKADSRPKKKL
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL

XP_022995750.1 uncharacterized protein LOC111491189 [Cucurbita maxima]3.3e-6094.24Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALG     FILMEHLKGQLSVS VPDQSQFSALNGSNLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
        SLEK+LSIDDIMASICSERRKKPGKRSRPKADSRP+KKL
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL

XP_023533769.1 uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]5.1e-6194.96Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA+G     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
        SLEK+LSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL

TrEMBL top hitse value%identityAlignment
A0A1S3BQH9 uncharacterized protein LOC1034924131.4e-4376.56Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEA EILK+NR+EDISWLCSLSESELD LISIKMLVLQRAK IGHE+LAEKFDLKTLRA+G     F+LMEHLKG+L  S V D SQ + LN  NLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSR
        ++EK+LSID+IMASICS+RRKKPGKR R
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSR

A0A5A7UQA1 Uncharacterized protein2.3e-4375.78Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEA EILK+NR+EDISWLCSLSESELD LISIKMLVLQRAK IGHE+LAEKFDLKTLRA+G     F+LMEHLKG+L  S V D SQ + LN  NLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSR
        ++EK+LSID+IMASICS+RRKKPGKR +
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSR

A0A6J1DR49 uncharacterized protein LOC1110230682.2e-4980.43Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA+G     F LMEHLKGQL  S VPDQSQ +ALNG NLLD 
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKK
        SLEK+LSID+IMAS+CS+RRKKPGKR R KADSR K +
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKK

A0A6J1ESQ9 uncharacterized protein LOC1114374147.2e-6194.96Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA+G     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
        SLEKVLSIDDIMASIC ERRKKPGKRSRPKADSRPKKKL
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL

A0A6J1K2S6 uncharacterized protein LOC1114911891.6e-6094.24Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS
        MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALG     FILMEHLKGQLSVS VPDQSQFSALNGSNLLDS
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDS

Query:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL
        SLEK+LSIDDIMASICSERRKKPGKRSRPKADSRP+KKL
Subjt:  SLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component3.1e-2445.8Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNL
        MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+LG+     +LMEH +   Q   S  P    Q   L+  NL
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNL

Query:  LDSSLEKVLSIDDIMASICSERRKKPGKRSR
        L + ++  + I++I+  IC  + KK  ++ R
Subjt:  LDSSLEKVLSIDDIMASICSERRKKPGKRSR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component3.1e-2445.8Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNL
        MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+LG+     +LMEH +   Q   S  P    Q   L+  NL
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNL

Query:  LDSSLEKVLSIDDIMASICSERRKKPGKRSR
        L + ++  + I++I+  IC  + KK  ++ R
Subjt:  LDSSLEKVLSIDDIMASICSERRKKPGKRSR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component3.1e-2445.8Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNL
        MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+LG+     +LMEH +   Q   S  P    Q   L+  NL
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNL

Query:  LDSSLEKVLSIDDIMASICSERRKKPGKRSR
        L + ++  + I++I+  IC  + KK  ++ R
Subjt:  LDSSLEKVLSIDDIMASICSERRKKPGKRSR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown7.7e-2348.12Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLRALGISTFWFILMEHLKGQL--SVSGVPDQSQ-FSALNGSN
        MEE  +ILK+NR +D++W CSLSESELD LIS+K LV++RAKV G EDL A+KFDLK LR+LG+     +LME+++ ++    S  P   Q  S L+  N
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLRALGISTFWFILMEHLKGQL--SVSGVPDQSQ-FSALNGSN

Query:  LLDSSLEKVLSIDDIMASICSER-RKKPGKRSR
        LL + ++  + I++I+  IC+++ +KK  KRSR
Subjt:  LLDSSLEKVLSIDDIMASICSER-RKKPGKRSR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown7.7e-2348.12Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLRALGISTFWFILMEHLKGQL--SVSGVPDQSQ-FSALNGSN
        MEE  +ILK+NR +D++W CSLSESELD LIS+K LV++RAKV G EDL A+KFDLK LR+LG+     +LME+++ ++    S  P   Q  S L+  N
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLRALGISTFWFILMEHLKGQL--SVSGVPDQSQ-FSALNGSN

Query:  LLDSSLEKVLSIDDIMASICSER-RKKPGKRSR
        LL + ++  + I++I+  IC+++ +KK  KRSR
Subjt:  LLDSSLEKVLSIDDIMASICSER-RKKPGKRSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGACTTTCTGATTAGCATTAAAATGCTAGT
TCTCCAGCGAGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTTTAGGTATTTCTACTTTCTGGTTTATTTTGATGGAGCATC
TTAAAGGACAACTTAGTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAGTTTTGTCAATTGATGAT
ATAATGGCAAGCATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ACACCTTGTTCGAAACGGAAAACATTGTGTTTTATATATAAACTATACATAAATAGAAACAATTAGACGTTGAAGAAATCAAACGAGTACAAAACGAGGGAGTCCTATCC
AACGTCCTGTTGAAAACCTAATTTCTTTGATCAACTCAACTCTGCCCTACTCCCCCGACGAACTCCTCGCCGTCGCTTCGCCGGATTCGAGCCAAGGCGACGGCGCGGGA
GGTTTGATTATCAGAATTCAGAGAAAAGAAGCTGAGAGGTACGGACTTAGATTTGCGATTCGCAAAGAAGACGGAGGAATTGAGGAAAATTTTGCGAACGGGAGATAGAA
AGAGGTTGCTACGAAGTGGAATTAAAGTGGAGAGTTAGGGCGACTCGAAGTCCTCGCCAAATTAAGGCTGTTTAACCATTGAAGTTTTCGCGGAATCTATACGTTCCGCA
CTTTTTCTGGATTAATTTAGTGGAAGATTTCTATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAG
CTTGACTTTCTGATTAGCATTAAAATGCTAGTTCTCCAGCGAGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTTTAGGTAT
TTCTACTTTCTGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTAGTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACA
GCAGTCTTGAGAAAGTTTTGTCAATTGATGATATAATGGCAAGCATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAG
AAGAAGTTGTGAATTAGAAAATGGCAGAAGTAGACACAGATTCATGGAGGTTGTCTTGGCCTAACTGATGGAACAATGCAGCTCCCACATTGCGAGACTTGGCGGTAATC
CTGCAGCCATGATCACGCAAACAATTTTGTTAGCCTTTATTGTAATTGTTGTTGCGTCAAATTGTGTATTGTCCATCATGGCGTCAATCAGTAATCAGGTTCCACTATTG
TTGTATTATTTCTATTTTGTTATAGTGTATGAAGCAAAGGAACCATTACAAATAAGTC
Protein sequenceShow/hide protein sequence
MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDD
IMASICSERRKKPGKRSRPKADSRPKKKL