CuGenDBv2

Gene ID	Carg08900
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein XRI1-like
Genome location	Carg_Chr02:9372718..9375880
RNA-Seq Expression	Carg08900
Synteny	Carg08900
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0007140 - male meiotic nuclear division (biological process) GO:0007143 - female meiotic nuclear division (biological process) GO:0009555 - pollen development (biological process) GO:0010165 - response to X-ray (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR039933 - Protein XRI1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7036253.1 Protein XRI1 [Cucurbita argyrosperma subsp. argyrosperma]

3.7e-181

100

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED
        MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED

Query:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN
        LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN
Subjt:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN

Query:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
        AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

XP_004144384.1 protein XRI1 [Cucumis sativus]

1.6e-152

87.14

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC
        MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAYHVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETS+C
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC

Query:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF
         EDLSSRFLKSHNK VSSPAA+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL+FAGTSD QIDVS       EFC+ APEF
Subjt:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF

Query:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
        KSN VQHHPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGG
Subjt:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG

Query:  KGSITIMRTRG
        KGSITIMRTRG
Subjt:  KGSITIMRTRG

XP_008461886.1 PREDICTED: protein XRI1 isoform X2 [Cucumis melo]

2.8e-152

87.46

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC
        MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAYHVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETSLC
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC

Query:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF
         EDLSSRFLKSHNKDVSS AA+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL FAGTSD QIDVS       EFC+ APEF
Subjt:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF

Query:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
        KSN V HHPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
Subjt:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG

Query:  KGSITIMRTRG
        KGSITIMRTRG
Subjt:  KGSITIMRTRG

XP_022930895.1 protein XRI1-like [Cucurbita moschata]

7.6e-174

97.73

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED
        MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED

Query:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN
        LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVS       EFCNVAPEFKSN
Subjt:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN

Query:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
        AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

XP_022995967.1 protein XRI1-like [Cucurbita maxima]

1.2e-171

96.43

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED
        MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDD NKKSEESRETHSQAKRRRMLQFTAQD+ETSLCCED
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED

Query:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN
        LSSRFLKSHNKDVSSPAA+PDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVS       EFCNVAPEFKSN
Subjt:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN

Query:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
        AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEG KGS
Subjt:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBN6 Uncharacterized protein

7.9e-153

87.14

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC
        MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAYHVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETS+C
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC

Query:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF
         EDLSSRFLKSHNK VSSPAA+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL+FAGTSD QIDVS       EFC+ APEF
Subjt:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF

Query:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
        KSN VQHHPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGG
Subjt:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG

Query:  KGSITIMRTRG
        KGSITIMRTRG
Subjt:  KGSITIMRTRG

A0A1S3CFL6 protein XRI1 isoform X2

1.4e-152

87.46

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC
        MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAYHVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETSLC
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC

Query:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF
         EDLSSRFLKSHNKDVSS AA+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL FAGTSD QIDVS       EFC+ APEF
Subjt:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF

Query:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
        KSN V HHPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
Subjt:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG

Query:  KGSITIMRTRG
        KGSITIMRTRG
Subjt:  KGSITIMRTRG

A0A6J1E034 protein XRI1

1.5e-151

86.17

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC
        MDD+ KNND+W+WDGDGY IQKD DL   E +WDGVSENDDLSYV DETTPVKACGDLAYHV ++D RNKKSEESRETHSQAKRRRMLQF AQD+ TSLC
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDL---ECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLC

Query:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF
         EDLSSRFLKS NKDVSSPAA+P+VPY IPECSGLS NVP SC ENLDHSPEGWI++C NDADMHCSPEDLNFAGTSD QIDVS       EFC+V PE 
Subjt:  CEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEF

Query:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG
        KSNAVQHHPTR PRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH PEDPSQSYPTSAFSGKPVVGKTKIHTEGG
Subjt:  KSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGG

Query:  KGSITIMRTRG
        KGSITIMRTRG
Subjt:  KGSITIMRTRG

A0A6J1EY26 protein XRI1-like

3.7e-174

97.73

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED
        MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED

Query:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN
        LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVS       EFCNVAPEFKSN
Subjt:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN

Query:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
        AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

A0A6J1K0G1 protein XRI1-like

5.8e-172

96.43

Show/hide

Query:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED
        MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDD NKKSEESRETHSQAKRRRMLQFTAQD+ETSLCCED
Subjt:  MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCED

Query:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN
        LSSRFLKSHNKDVSSPAA+PDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVS       EFCNVAPEFKSN
Subjt:  LSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSN

Query:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
        AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEG KGS
Subjt:  AVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

SwissProt top hits

e value

%identity

Alignment

Q6NLW5 Protein XRI1

2.4e-66

51.47

Show/hide

Query:  NDSWNWDGDGYTIQKDTDL----ECLWDGVSEN-DDLSYVF-DETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDL
        + SWNW  D Y  Q  +      +C    V+ N +D SY+F DE TPVKAC +L YHVT  +D N+K E   ET S  KRRRMLQF  Q  ETSL   + 
Subjt:  NDSWNWDGDGYTIQKDTDL----ECLWDGVSEN-DDLSYVF-DETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDL

Query:  SSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNA
         S  LKS  +D +    +P+    I    G S +   S  E LD   E W ADCLNDA+    P+DLNF G+ D Q+D+S       E+ NV PE ++  
Subjt:  SSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNA

Query:  VQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI
        VQ   TR   N+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSI
Subjt:  VQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI

Query:  TIMRTRG
        TIMRTRG
Subjt:  TIMRTRG

Arabidopsis top hits

e value

%identity

Alignment

AT5G48720.1 x-ray induced transcript 1

1.8e-64

54.21

Show/hide

Query:  DDLSYVF-DETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSAN
        +D SY+F DE TPVKAC +L YHVT  +D N+K E   ET S  KRRRMLQF  Q  ETSL   +  S  LKS  +D +    +P+    I    G S +
Subjt:  DDLSYVF-DETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSAN

Query:  VPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYP
           S  E LD   E W ADCLNDA+    P+DLNF G+ D Q+D+S       E+ NV PE ++  VQ   TR   N+IFKGRKS+ R  +KL SS+ YP
Subjt:  VPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYP

Query:  FAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        FAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Subjt:  FAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

AT5G48720.2 x-ray induced transcript 1

1.7e-67

51.47

Show/hide

Query:  NDSWNWDGDGYTIQKDTDL----ECLWDGVSEN-DDLSYVF-DETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDL
        + SWNW  D Y  Q  +      +C    V+ N +D SY+F DE TPVKAC +L YHVT  +D N+K E   ET S  KRRRMLQF  Q  ETSL   + 
Subjt:  NDSWNWDGDGYTIQKDTDL----ECLWDGVSEN-DDLSYVF-DETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDL

Query:  SSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNA
         S  LKS  +D +    +P+    I    G S +   S  E LD   E W ADCLNDA+    P+DLNF G+ D Q+D+S       E+ NV PE ++  
Subjt:  SSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNA

Query:  VQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI
        VQ   TR   N+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSI
Subjt:  VQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI

Query:  TIMRTRG
        TIMRTRG
Subjt:  TIMRTRG

Sequences

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CDS sequence

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ATGGACGATTCCGCCAAAAACAATGATTCTTGGAATTGGGATGGAGATGGATATACCATCCAGAAGGATACCGATTTAGAATGCCTTTGGGACGGGGTGTCTGAAAATGA
TGATCTTTCGTATGTGTTCGATGAAACAACTCCGGTTAAAGCTTGCGGGGACTTGGCATACCATGTCACGCATAATGATGACAGAAACAAGAAATCAGAAGAATCCAGGG
AAACTCATTCACAAGCGAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATAGAAACTTCACTCTGCTGTGAAGATTTGTCTTCTAGATTTCTAAAATCACATAAT
AAGGATGTTTCTAGTCCTGCTGCTGTACCTGATGTTCCATACGAGATTCCCGAGTGCTCTGGACTCTCAGCTAATGTGCCGACTTCTTGTCTTGAGAATTTGGATCACTC
ACCTGAAGGTTGGATTGCTGATTGCCTTAATGATGCTGATATGCATTGCAGCCCTGAGGATTTGAACTTTGCTGGGACTTCGGACAATCAAATCGATGTATCAGGTAAAG
TAAAATGTTGTTACGAGTTTTGTAATGTTGCACCTGAGTTCAAATCTAACGCGGTCCAACATCATCCTACTCGAGTTCCTCGGAACATAATATTTAAAGGTCGAAAGTCG
TATATTAGAACTCCGACTAAGTTAGCTTCTTCAGTTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGAGATGTCACCTTGAAGGACATAAACCAGCGGAT
CCGCACGCCTCCACCTTCAAAACTGAAGCATCAACCTGAAGACCCATCTCAATCATACCCAACATCAGCCTTCTCCGGTAAGCCTGTCGTCGGTAAAACCAAGATTCATA
CTGAAGGTGGAAAGGGCAGCATTACAATCATGAGGACCAGAGGTTGA

mRNA sequence

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TTCTTCTTCGTCTATTAGCCCCCATTATCTAGCTCCCTAATCCAACATCCAGCGGCTGAACTGGGTCGCTCTTCAATTGCATCTTTTTCGATCGCAGTCAAGAACAATTT
GCCGCTGGCACTCTTCTTTTTCTCTTGCAACCATGGACGATTCCGCCAAAAACAATGATTCTTGGAATTGGGATGGAGATGGATATACCATCCAGAAGGATACCGATTTA
GAATGCCTTTGGGACGGGGTGTCTGAAAATGATGATCTTTCGTATGTGTTCGATGAAACAACTCCGGTTAAAGCTTGCGGGGACTTGGCATACCATGTCACGCATAATGA
TGACAGAAACAAGAAATCAGAAGAATCCAGGGAAACTCATTCACAAGCGAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATAGAAACTTCACTCTGCTGTGAAG
ATTTGTCTTCTAGATTTCTAAAATCACATAATAAGGATGTTTCTAGTCCTGCTGCTGTACCTGATGTTCCATACGAGATTCCCGAGTGCTCTGGACTCTCAGCTAATGTG
CCGACTTCTTGTCTTGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGATTGCCTTAATGATGCTGATATGCATTGCAGCCCTGAGGATTTGAACTTTGCTGGGAC
TTCGGACAATCAAATCGATGTATCAGGTAAAGTAAAATGTTGTTACGAGTTTTGTAATGTTGCACCTGAGTTCAAATCTAACGCGGTCCAACATCATCCTACTCGAGTTC
CTCGGAACATAATATTTAAAGGTCGAAAGTCGTATATTAGAACTCCGACTAAGTTAGCTTCTTCAGTTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGA
GATGTCACCTTGAAGGACATAAACCAGCGGATCCGCACGCCTCCACCTTCAAAACTGAAGCATCAACCTGAAGACCCATCTCAATCATACCCAACATCAGCCTTCTCCGG
TAAGCCTGTCGTCGGTAAAACCAAGATTCATACTGAAGGTGGAAAGGGCAGCATTACAATCATGAGGACCAGAGGTTGAACGAACCATGTATAACAATTCTCGCTATCCA
AACGTTCCTTTTGCCGCCCCTCGGTCATCCTTGAGGGACTTGTAAAATGTCATGGCCATGTAGTAAGCAGTACAGAAGCTGATTAATGTTCATTTTTGGTATAGAGAAAG
AGAGAGGGAGAGATGTGTAGGAACATTAGGGTTGCCCTTGGAATCCCTAATCATATAACTTCATTAATATGTTTATGCCTCCAAGCGAACTCTTGTAGGTCCGAGTCCGA
GTTCAAGTTCGAGTTCGATACCCATAAGGTTCGTGTCATTTTAGACTTGGAAAACAACACTCCTTATCATCATGTTTATTCTTAATGCCTTGTGGAACTCTGCTGTAATC
AAAATCTTTTGGTGGAAAGCTTGAAAACTGCAGTCAGCTTTTTTATTTTTCCTGCTTTTGTGTTTGGTTGACCGTGGAAATATGAGAATCAAGTAGGATCTTATTGTCTC
ACAGGCTTACAGCCTTACAGGTTCTTGGTTAAAGAGAAAATAGGTGAAAAGATGTGCTTGAGAAGCCTTCCTCTCTGAGCTTGTCTTCT

Protein sequence

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MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHN
KDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKS
YIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

Carg08900 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome