| GenBank top hits | e value | %identity | Alignment |
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| KAG7036265.1 Sm-like protein LSM5, partial [Cucurbita argyrosperma subsp. argyrosperma] | 1.2e-58 | 100 | Show/hide |
Query: NRRRDGKSLNKTSRLFAFLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQIL
NRRRDGKSLNKTSRLFAFLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQIL
Subjt: NRRRDGKSLNKTSRLFAFLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQIL
Query: LNGNNIAILVPGGSPDPE
LNGNNIAILVPGGSPDPE
Subjt: LNGNNIAILVPGGSPDPE
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| XP_004152020.2 sm-like protein LSM5 [Cucumis sativus] | 3.4e-42 | 89.11 | Show/hide |
Query: FLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
F SL+F + MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
Subjt: FLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
Query: E
E
Subjt: E
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| XP_004504703.1 sm-like protein LSM5 [Cicer arietinum] | 1.7e-41 | 100 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| XP_008454507.1 PREDICTED: sm-like protein LSM5 [Cucumis melo] | 4.5e-42 | 89.11 | Show/hide |
Query: FLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
F SL+F + MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
Subjt: FLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
Query: E
E
Subjt: E
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| XP_021659196.1 sm-like protein LSM5 [Hevea brasiliensis] | 1.0e-41 | 91.75 | Show/hide |
Query: SLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
SL L MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: SLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0B0NQ45 U6 snRNA-associated Sm-like protein LSm5 | 8.3e-42 | 100 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| A0A1S3BZJ2 U6 snRNA-associated Sm-like protein LSm5 | 2.2e-42 | 89.11 | Show/hide |
Query: FLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
F SL+F + MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
Subjt: FLTESLTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
Query: E
E
Subjt: E
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| A0A2P5WT65 U6 snRNA-associated Sm-like protein LSm5 | 8.3e-42 | 100 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| A0A5B7A1J2 U6 snRNA-associated Sm-like protein LSm5 (Fragment) | 7.5e-43 | 93.75 | Show/hide |
Query: LTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
L F + Q+MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: LTFAEDLQSMANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| I3SAC1 U6 snRNA-associated Sm-like protein LSm5 | 8.3e-42 | 100 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| SwissProt top hits | e value | %identity | Alignment |
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| P62322 U6 snRNA-associated Sm-like protein LSm5 | 4.8e-31 | 79.75 | Show/hide |
Query: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
NPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI +LVPGG
Subjt: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| Q2HJH0 U6 snRNA-associated Sm-like protein LSm5 | 4.8e-31 | 79.75 | Show/hide |
Query: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
NPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI +LVPGG
Subjt: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| Q5R628 U6 snRNA-associated Sm-like protein LSm5 | 4.8e-31 | 79.75 | Show/hide |
Query: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
NPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI +LVPGG
Subjt: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| Q9FKB0 Sm-like protein LSM5 | 3.0e-41 | 95.29 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPD
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYEITAEGRR+TKLDQILLNGNNIAILVPGGSP+
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPD
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| Q9Y4Y9 U6 snRNA-associated Sm-like protein LSm5 | 4.8e-31 | 79.75 | Show/hide |
Query: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
NPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI +LVPGG
Subjt: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G18740.1 Small nuclear ribonucleoprotein family protein | 2.5e-06 | 36.36 | Show/hide |
Query: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
P LI R + SK IW+ + D + G + GFD Y+N+VL++ E I R+ L +ILL G+NI +++ G
Subjt: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| AT3G14080.1 Small nuclear ribonucleoprotein family protein | 1.8e-04 | 28.38 | Show/hide |
Query: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIL
P ++ S + + K+ V+++ ++L+GTLR FD + N VLE E I E L ++ G N+ ++
Subjt: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIL
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| AT3G14080.2 Small nuclear ribonucleoprotein family protein | 1.8e-04 | 28.38 | Show/hide |
Query: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIL
P ++ S + + K+ V+++ ++L+GTLR FD + N VLE E I E L ++ G N+ ++
Subjt: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIL
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| AT4G30330.1 Small nuclear ribonucleoprotein family protein | 1.1e-06 | 36.36 | Show/hide |
Query: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
P LI R + SK IW+ + D + G + GFD Y+N+VL++ E I + R+ L +ILL G+NI +++ G
Subjt: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| AT5G48870.1 Small nuclear ribonucleoprotein family protein | 2.1e-42 | 95.29 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPD
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYEITAEGRR+TKLDQILLNGNNIAILVPGGSP+
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPD
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