; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg08917 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08917
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionC2H2-like zinc finger protein
Genome locationCarg_Chr02:9453079..9453588
RNA-Seq ExpressionCarg08917
SyntenyCarg08917
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606329.1 Protein LATE FLOWERING, partial [Cucurbita argyrosperma subsp. sororia]8.3e-90100Show/hide
Query:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA
        MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA
Subjt:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA

Query:  SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
        SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
Subjt:  SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL

XP_022931139.1 protein LATE FLOWERING [Cucurbita moschata]9.5e-8694.19Show/hide
Query:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSA---SSRPLSVFAGSQQLHHPAILPHPMYIAA
        MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR+SDYSSSS+   SSRPLSVFAG+QQLHHPAILPHP+YIAA
Subjt:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSA---SSRPLSVFAGSQQLHHPAILPHPMYIAA

Query:  HGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
        HGA+LHCFPN+QQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDE+HVLNWQRSIKKDKEKEQKLDLSLHL
Subjt:  HGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL

XP_022996351.1 protein LATE FLOWERING-like [Cucurbita maxima]2.9e-8797.04Show/hide
Query:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA
        MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSS SSRPLSVFAG+QQLHHPAILPHPMYIAAHG 
Subjt:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA

Query:  SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
        +LHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEE+VLNWQRSIKKDKEKEQKLDLSLHL
Subjt:  SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL

XP_023532770.1 protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]2.0e-8898.22Show/hide
Query:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA
        MEDEEQPL VAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSS SSRPLSVFAGSQQLHHPAILPHPMYIAAHGA
Subjt:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA

Query:  SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
        +LHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
Subjt:  SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL

XP_038888938.1 protein LATE FLOWERING [Benincasa hispida]4.0e-5264.32Show/hide
Query:  MEDEEQPLQVAESSS--VEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSAS------SRPLSVFAGSQQLHHPAILPHP
        ME EE+  QVAE+++  VEMEETP+R+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRISDYS++ +S      + P  VF  S Q HHP +LP P
Subjt:  MEDEEQPLQVAESSS--VEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSAS------SRPLSVFAGSQQLHHPAILPHP

Query:  MYIAAHGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRY-QCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL
        +YIA HG +LHCFPN+QQ+ Y         E+MVY GGVC+ NRY QCG DEE++LNW+RSIKK       DKEKEQKLDLSLHL
Subjt:  MYIAAHGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRY-QCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL

TrEMBL top hitse value%identityAlignment
A0A0A0LE19 C2H2-type domain-containing protein1.7e-4866.67Show/hide
Query:  MEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLS---VFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYD
        MEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRI DYS S  S  P     VFA SQQ HHP +LPHP+YIA HGA+LHCFPN+QQ+ Y 
Subjt:  MEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLS---VFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYD

Query:  GLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL
                E+MV+ GGVC  NRY   +DEE++LNW+R+IKK       DKEKEQKLDLSLHL
Subjt:  GLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL

A0A1S3BIU8 protein LATE FLOWERING-like2.9e-4862.96Show/hide
Query:  MEDEEQPLQVAESSS---------VEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSAS--SRPLS-VFAGSQQLHHPA-
        ME EE   +V E  +         +EMEETPSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRI DYS S  S  S P S VFA SQQ HHPA 
Subjt:  MEDEEQPLQVAESSS---------VEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSAS--SRPLS-VFAGSQQLHHPA-

Query:  ILPHPMYIAAHGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL
        +LPHP+YIA HGA+LHCFPN+QQ+ Y         E+MV+ GGVCS NRY   +DEE++LNW+R+IK        DKEKEQKLDLSLHL
Subjt:  ILPHPMYIAAHGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL

A0A5A7VIQ7 Protein LATE FLOWERING-like2.9e-4868.71Show/hide
Query:  MEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSAS--SRPLS-VFAGSQQLHHPA-ILPHPMYIAAHGASLHCFPNSQQVFY
        MEETPSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRI DYS S  S  S P S VFA SQQ HHPA +LPHP+YIA HGA+LHCFPN+QQ+ Y
Subjt:  MEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSAS--SRPLS-VFAGSQQLHHPA-ILPHPMYIAAHGASLHCFPNSQQVFY

Query:  DGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL
                 E+MV+ GGVCS NRY   +DEE++LNW+R+IK        DKEKEQKLDLSLHL
Subjt:  DGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL

A0A6J1ETH7 protein LATE FLOWERING4.6e-8694.19Show/hide
Query:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSA---SSRPLSVFAGSQQLHHPAILPHPMYIAA
        MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR+SDYSSSS+   SSRPLSVFAG+QQLHHPAILPHP+YIAA
Subjt:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSA---SSRPLSVFAGSQQLHHPAILPHPMYIAA

Query:  HGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
        HGA+LHCFPN+QQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDE+HVLNWQRSIKKDKEKEQKLDLSLHL
Subjt:  HGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL

A0A6J1K4H5 protein LATE FLOWERING-like1.4e-8797.04Show/hide
Query:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA
        MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSS SSRPLSVFAG+QQLHHPAILPHPMYIAAHG 
Subjt:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA

Query:  SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
        +LHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEE+VLNWQRSIKKDKEKEQKLDLSLHL
Subjt:  SLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL

SwissProt top hitse value%identityAlignment
Q39263 Zinc finger protein 48.2e-0850Show/hide
Query:  AESSSVEMEE-----TPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRI
        +ESS+ E ++        R+F C +C RKF +SQALGGHQNAHK+ERT  ++A R+
Subjt:  AESSSVEMEE-----TPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRI

Q39266 Zinc finger protein 72.0e-0937.04Show/hide
Query:  ESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRIS-----DYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFP
        ++ S + E  P R+F C +C RKF +SQALGGHQNAHK+ERT  ++A  +       +   + +S  L + A S  LHH    P P+    H      F 
Subjt:  ESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRIS-----DYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFP

Query:  NSQQVFYD
        N+  +F+D
Subjt:  NSQQVFYD

Q42485 Zinc finger protein 11.1e-0752.73Show/hide
Query:  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFA
        R+F C +C RKF +SQALGGHQNAHK+ERT  ++ +    Y   + SS P S FA
Subjt:  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFA

Q9FFX4 Zinc finger protein KNUCKLES3.7e-0873.53Show/hide
Query:  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRK
        R+FPC +C RKF TSQALGGHQNAHK+ER A R+
Subjt:  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRK

Q9FKA9 Protein LATE FLOWERING8.5e-2140Show/hide
Query:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA
        +E EE+     E++  +   +  RIFPCLFCSRKF +SQALGGHQNAHKKERTA R+AKR  D+ +++     L VF  S   HH  IL +P       A
Subjt:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA

Query:  SLHCFPN---SQQVFYDG---LGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
        S+ CFP       +F      + +    +     GG C   R    +   +V+N       DK K+Q LDLSLHL
Subjt:  SLHCFPN---SQQVFYDG---LGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 71.4e-1037.04Show/hide
Query:  ESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRIS-----DYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFP
        ++ S + E  P R+F C +C RKF +SQALGGHQNAHK+ERT  ++A  +       +   + +S  L + A S  LHH    P P+    H      F 
Subjt:  ESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRIS-----DYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFP

Query:  NSQQVFYD
        N+  +F+D
Subjt:  NSQQVFYD

AT1G66140.1 zinc finger protein 45.9e-0950Show/hide
Query:  AESSSVEMEE-----TPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRI
        +ESS+ E ++        R+F C +C RKF +SQALGGHQNAHK+ERT  ++A R+
Subjt:  AESSSVEMEE-----TPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRI

AT1G80730.1 zinc-finger protein 17.6e-0952.73Show/hide
Query:  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFA
        R+F C +C RKF +SQALGGHQNAHK+ERT  ++ +    Y   + SS P S FA
Subjt:  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFA

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein2.6e-0973.53Show/hide
Query:  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRK
        R+FPC +C RKF TSQALGGHQNAHK+ER A R+
Subjt:  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRK

AT5G48890.1 C2H2-like zinc finger protein6.0e-2240Show/hide
Query:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA
        +E EE+     E++  +   +  RIFPCLFCSRKF +SQALGGHQNAHKKERTA R+AKR  D+ +++     L VF  S   HH  IL +P       A
Subjt:  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGA

Query:  SLHCFPN---SQQVFYDG---LGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
        S+ CFP       +F      + +    +     GG C   R    +   +V+N       DK K+Q LDLSLHL
Subjt:  SLHCFPN---SQQVFYDG---LGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAAGAACAGCCTTTACAAGTTGCTGAATCCAGCAGTGTTGAAATGGAAGAAACCCCATCAAGAATCTTCCCTTGTTTGTTCTGTTCAAGGAAGTTTCAAAC
CTCTCAAGCTTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGCGCACTGCCGTGAGGAAGGCCAAGCGGATATCTGATTACTCCTCCTCGTCGGCGTCGTCACGGCCAT
TGTCGGTATTTGCAGGCAGCCAACAGCTTCATCATCCAGCTATATTGCCACATCCAATGTACATTGCAGCTCATGGAGCTAGTCTTCATTGTTTCCCCAATAGCCAACAA
GTGTTCTATGATGGCTTGGGAGTTGTTCCCAAGTTTGAGGACATGGTTTACTATGGTGGGGTTTGTTCATACAATAGGTATCAATGTGGGGAAGATGAAGAACATGTGTT
GAATTGGCAGAGAAGCATAAAGAAAGACAAGGAAAAAGAACAAAAACTTGATCTTTCTCTTCATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGAAGAACAGCCTTTACAAGTTGCTGAATCCAGCAGTGTTGAAATGGAAGAAACCCCATCAAGAATCTTCCCTTGTTTGTTCTGTTCAAGGAAGTTTCAAAC
CTCTCAAGCTTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGCGCACTGCCGTGAGGAAGGCCAAGCGGATATCTGATTACTCCTCCTCGTCGGCGTCGTCACGGCCAT
TGTCGGTATTTGCAGGCAGCCAACAGCTTCATCATCCAGCTATATTGCCACATCCAATGTACATTGCAGCTCATGGAGCTAGTCTTCATTGTTTCCCCAATAGCCAACAA
GTGTTCTATGATGGCTTGGGAGTTGTTCCCAAGTTTGAGGACATGGTTTACTATGGTGGGGTTTGTTCATACAATAGGTATCAATGTGGGGAAGATGAAGAACATGTGTT
GAATTGGCAGAGAAGCATAAAGAAAGACAAGGAAAAAGAACAAAAACTTGATCTTTCTCTTCATTTATAG
Protein sequenceShow/hide protein sequence
MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQ
VFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL