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Carg08919 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08919
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTF-B3 domain-containing protein
Genome locationCarg_Chr02:9463033..9465311
RNA-Seq ExpressionCarg08919
SyntenyCarg08919
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606331.1 hypothetical protein SDJN03_03648, partial [Cucurbita argyrosperma subsp. sororia]1.5e-89100Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
XP_004152015.1 uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus]1.8e-7484.18Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHN PSIS HPL RHRN TI  HSQ LPLNSLKL++QSFL+N +I KLRTRGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGTDLVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        P+ARISV I AL+IGLFL KSVLSTA FVLAM+GAIYFIFIALNKDEGPRGGGGS+SS  STEETLEEAR+IMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
XP_022931135.1 uncharacterized protein LOC111437405 [Cucurbita moschata]6.2e-8898.31Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHNLPSISSHPLERHRN TIFAHSQFLPLNSLKLRKQ FLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGT+LVPGSVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
XP_022996352.1 uncharacterized protein LOC111491610 [Cucurbita maxima]1.3e-8597.18Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLW SRIGKLR R S SFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
XP_023532771.1 uncharacterized protein LOC111794841 [Cucurbita pepo subsp. pepo]1.5e-8698.31Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFL NSRIGKLRTR SDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
TrEMBL top hitse value%identityAlignment
A0A0A0LCA2 Uncharacterized protein5.0e-5181.06Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHN PSIS HPL RHRN TI  HSQ LPLNSLKL++QSFL+N +I KLRTRGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGTDLVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAM
        P+ARISV I AL+IGLFL KSVLSTA FVL +
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAM
A0A1S3BHT2 uncharacterized protein LOC1034898042.6e-7182.12Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHN PSIS+HPL RHRN TI  HSQFLPLNSLKL+KQ     S+I KLR RGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGTDLVPGSVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTA--STEETLEEARKIMEKYK
        P+ARISV I AL+IGLFL KS+LSTA FVLAM+GAIYFIFIALNKDEGPRGGGGS+SS++  STEETLEEAR+IMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTA--STEETLEEARKIMEKYK
A0A6J1DZ75 uncharacterized protein LOC1110259707.7e-6880.34Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASS LFHN  SIS HP  RHRN  IF HSQFLP NSLKL+KQS   NS+I KL  RGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT LVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGS-ASSTASTEETLEEARKIMEKYK
        P+ARISVAI A +I LFLLKSVLSTA FVLAM+GAIYF+FIALNKDEGPRGGGGS +SST STEETLEEAR+IMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGS-ASSTASTEETLEEARKIMEKYK
A0A6J1ESP6 uncharacterized protein LOC1114374053.0e-8898.31Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHNLPSISSHPLERHRN TIFAHSQFLPLNSLKLRKQ FLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGT+LVPGSVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
A0A6J1K1P0 uncharacterized protein LOC1114916106.3e-8697.18Show/hide
Query:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR
        MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLW SRIGKLR R S SFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVP SVPR
Subjt:  MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPR

Query:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
        PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
Subjt:  PVARISVAIAALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G13220.1 unknown protein2.2e-3555.13Show/hide
Query:  TIFAHSQFL-PLNSLKLRKQSFL-WNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPRPVARISVAIAALSIGLFLLKSV
        T F +S FL P + LKL+  S L   +RI  L+ +   S  +V +AQ++FL+V +T W +GKDGIEAGT+LVP SVPRPVARISV IAAL++ LF++KS 
Subjt:  TIFAHSQFL-PLNSLKLRKQSFL-WNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPRPVARISVAIAALSIGLFLLKSV

Query:  LSTAAFVLAMVGAIYFIFIALNKDEGPR-GGGGSASSTASTEETLEEARKIMEKYK
        LSTA FVL  +G  YF+FIALNKDE P+  G  ++S + S ++ LEEA+KIM+KYK
Subjt:  LSTAAFVLAMVGAIYFIFIALNKDEGPR-GGGGSASSTASTEETLEEARKIMEKYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCGTGTCTATTTCACAATTTACCTTCAATTTCATCGCACCCATTAGAACGCCATAGAAACTCAACCATTTTCGCCCATTCGCAGTTCCTTCCTTTGAATTC
GTTGAAGCTCCGAAAACAATCTTTCCTCTGGAATTCACGAATTGGGAAGCTTAGAACTCGAGGCTCTGATTCTTTCCCTGTTGTATATGCTGCACAGAACAATTTCTTGA
GAGTTTTTCAGACAGTTTGGAAGGTTGGAAAGGATGGGATTGAGGCAGGAACAGACCTGGTGCCTGGCTCTGTACCAAGGCCTGTAGCAAGGATATCTGTTGCAATAGCT
GCATTATCTATTGGACTCTTTTTGCTCAAGTCAGTCCTATCTACAGCCGCATTTGTGCTGGCTATGGTGGGAGCAATTTATTTCATCTTTATAGCTTTGAATAAAGATGA
AGGGCCAAGGGGAGGTGGAGGCTCTGCCTCCTCCACAGCCTCCACAGAGGAGACTCTTGAAGAAGCCAGAAAAATAATGGAGAAGTACAAATAG
mRNA sequenceShow/hide mRNA sequence
TTCGTTCATCTCTCCAATTTCGCCATCGATTCAGTGTATCTGATTTATTCAAATGGCTTCTTCGTGTCTATTTCACAATTTACCTTCAATTTCATCGCACCCATTAGAAC
GCCATAGAAACTCAACCATTTTCGCCCATTCGCAGTTCCTTCCTTTGAATTCGTTGAAGCTCCGAAAACAATCTTTCCTCTGGAATTCACGAATTGGGAAGCTTAGAACT
CGAGGCTCTGATTCTTTCCCTGTTGTATATGCTGCACAGAACAATTTCTTGAGAGTTTTTCAGACAGTTTGGAAGGTTGGAAAGGATGGGATTGAGGCAGGAACAGACCT
GGTGCCTGGCTCTGTACCAAGGCCTGTAGCAAGGATATCTGTTGCAATAGCTGCATTATCTATTGGACTCTTTTTGCTCAAGTCAGTCCTATCTACAGCCGCATTTGTGC
TGGCTATGGTGGGAGCAATTTATTTCATCTTTATAGCTTTGAATAAAGATGAAGGGCCAAGGGGAGGTGGAGGCTCTGCCTCCTCCACAGCCTCCACAGAGGAGACTCTT
GAAGAAGCCAGAAAAATAATGGAGAAGTACAAATAGTGTTACTTGCGGTAAGCCATTCCCCATAAATTACTTCAAAATCGAACCGATTTTCAGCTTTGTAGGCTGTATAC
ATTTTTGAGGTCGCTTGACCGTGCAAGAGTAGTTATGTGCTGGTATTTTATACTACTGAAGGTTGTAAATACCATGAATTTGAGGTGTACGAGTATATCGAACACACTGC
TCTCTGTATGATTAAGATGCAAAGCTATAGTTTTCTGGGTCATGCACCATGTCCAATTGTATCTGCTGAGGCAATGACCCAGATATCAAATGTTTGTAACTATTTAGATG
TTTGAACTCTATCCAATGATATGCTTAGTGAAGATTTAGATTTATCTTCAATACAGTCACTGAAGTCTATATGTGCTGTTCCTGTGCATCTTTGATTCATGATGAAGCTA
TCCCTTGTTGTAAATCTGTTCCAAAGAAGGTTCTTTCGCCATAGTTGTAGCCTTGTTATTTGAAGTACGAGTTAGCTCTATATCATAACTGTGTCCATAGGCAAGAATCT
GAGTGTAACACCCCAAACCCACCGTTAGTAGATATTGTCC
Protein sequenceShow/hide protein sequence
MASSCLFHNLPSISSHPLERHRNSTIFAHSQFLPLNSLKLRKQSFLWNSRIGKLRTRGSDSFPVVYAAQNNFLRVFQTVWKVGKDGIEAGTDLVPGSVPRPVARISVAIA
ALSIGLFLLKSVLSTAAFVLAMVGAIYFIFIALNKDEGPRGGGGSASSTASTEETLEEARKIMEKYK