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Carg08920 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08920
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionacanthoscurrin-2-like
Genome locationCarg_Chr02:9465618..9466109
RNA-Seq ExpressionCarg08920
SyntenyCarg08920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606332.1 hypothetical protein SDJN03_03649, partial [Cucurbita argyrosperma subsp. sororia]2.9e-55100Show/hide
Query:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGG
        MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGG
Subjt:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGG

Query:  GGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
        GGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
Subjt:  GGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP

XP_011652144.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]1.5e-1166.67Show/hide
Query:  MAN-ELILVMAMAMVMVAFAGCVTARTAPND-GAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGH
        MAN +L L++ MAM M AFA  VTART PND  AK ++DQKNF+NYGGVGGFSGIGDSGLPFGG           GIGG  GGLGGGGGLGGLGGGIGG 
Subjt:  MAN-ELILVMAMAMVMVAFAGCVTARTAPND-GAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGH

Query:  GGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGL
        GG         GIGG+GGG G GG+ GGIGG GGGGGL
Subjt:  GGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGL

XP_022931134.1 acanthoscurrin-2-like [Cucurbita moschata]1.1e-4689.57Show/hide
Query:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGG
        MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGH  
Subjt:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGG

Query:  GGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
                      GGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGG FVKIP
Subjt:  GGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP

XP_022996355.1 glycine-rich protein 23-like [Cucurbita maxima]2.3e-5295.83Show/hide
Query:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI-----GGGIGGLGGGGGLGGLGGGI
        MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI     GGGIGGLGGGGGLGGLGGGI
Subjt:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI-----GGGIGGLGGGGGLGGLGGGI

Query:  GGHGGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
        GGHGGGGGLGGL GG GGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
Subjt:  GGHGGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP

XP_023532938.1 acanthoscurrin-2-like [Cucurbita pepo subsp. pepo]5.1e-5295.24Show/hide
Query:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI-----GGGIGGLGGGGGLGGLGGGI
        MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI     GGGIGGLGGGGGLGGLGGGI
Subjt:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI-----GGGIGGLGGGGGLGGLGGGI

Query:  GGHGGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
        GGHGGGGGLGGL GGIGG GGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGG+GIGVGGGFVKIP
Subjt:  GGHGGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP

TrEMBL top hitse value%identityAlignment
A0A2N9GEE9 Uncharacterized protein2.2e-0856.86Show/hide
Query:  LILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIG---GGIGGLGGGGGLGGLGGGIGGHGGG
        +++V+A+A+V        TART P+D    ++DQKNF +YGGVGG+SG+G +GLP+GG GG  G GGG G G   GG GGLGGGGGLGGLGGGI      
Subjt:  LILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIG---GGIGGLGGGGGLGGLGGGIGGHGGG

Query:  GGLGGLSGGIGGLGGGGGLGGLGG--GIGGYGGGGGLGGLGGGIGGYGGGGIG
                G+GGLGGG GLGGLGG  G+GG GG GGLGG GGG+GG  G G+G
Subjt:  GGLGGLSGGIGGLGGGGGLGGLGG--GIGGYGGGGGLGGLGGGIGGYGGGGIG

A0A5A7UCJ9 Acanthoscurrin-2-like3.0e-1064.03Show/hide
Query:  MAN---ELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGG
        MAN    L+LVMAMA    A A  V ARTAPN+ AK ++DQKNF+NYGGVGGFSGIGD GLPFGG     GFGG        GGLGGGGGLGGLGGG+GG
Subjt:  MAN---ELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGG

Query:  HGGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGL
         GG         GIGG+GGG G GG+ GGIGG GGGGGL
Subjt:  HGGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGL

A0A6J1ETH1 acanthoscurrin-2-like5.3e-4789.57Show/hide
Query:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGG
        MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGH  
Subjt:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGG

Query:  GGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
                      GGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGG FVKIP
Subjt:  GGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP

A0A6J1K6J1 glycine-rich protein 23-like1.1e-5295.83Show/hide
Query:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI-----GGGIGGLGGGGGLGGLGGGI
        MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI     GGGIGGLGGGGGLGGLGGGI
Subjt:  MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGI-----GGGIGGLGGGGGLGGLGGGI

Query:  GGHGGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
        GGHGGGGGLGGL GG GGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP
Subjt:  GGHGGGGGLGGLSGGIGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP

B9GR90 Uncharacterized protein8.8e-1061.21Show/hide
Query:  LILVMAMAMVMVAFAGCVT--------ARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIG
        ++LV+A+A V  +     T         + AP+D    ++DQKNFV+YGGVGG+SGIG  GLPFGG GG+   GG + + GG GGLGGGGGLGGLGGGIG
Subjt:  LILVMAMAMVMVAFAGCVT--------ARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIG

Query:  GHGGGGGLGGLSGGIGGLGGG-GGLGGLGGGIGGYGG-GGGLGGLGGGIGGYG-GGGIGIGVGGG
        G   GGG+GGL GG+GGLGGG GGLGG+GGG+GG GG GGG+GGLGG  GG G GGG+G GVGGG
Subjt:  GHGGGGGLGGLSGGIGGLGGG-GGLGGLGGGIGGYGG-GGGLGGLGGGIGGYG-GGGIGIGVGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATGAGCTGATTTTGGTTATGGCTATGGCTATGGTTATGGTTGCATTTGCAGGCTGTGTTACTGCAAGAACTGCCCCAAATGATGGGGCGAAAAGCGTCAGTGA
CCAAAAAAACTTCGTCAACTATGGTGGGGTTGGTGGCTTTTCTGGCATTGGTGACAGTGGACTCCCCTTTGGAGGGGCTGGGGGCGTTGTCGGGTTCGGCGGTGGCAGTG
GCATTGGCGGTGGCATTGGTGGACTCGGAGGGGGTGGTGGTTTAGGTGGGCTGGGCGGTGGCATTGGCGGACATGGAGGAGGTGGTGGCTTAGGCGGGCTCAGTGGTGGC
ATTGGTGGACTCGGAGGGGGTGGTGGCTTAGGCGGGCTCGGTGGTGGCATTGGTGGATACGGTGGGGGTGGTGGCTTAGGCGGGCTCGGCGGTGGCATTGGTGGATATGG
TGGGGGCGGTATCGGAATTGGAGTTGGTGGAGGATTTGTCAAGATCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATGAGCTGATTTTGGTTATGGCTATGGCTATGGTTATGGTTGCATTTGCAGGCTGTGTTACTGCAAGAACTGCCCCAAATGATGGGGCGAAAAGCGTCAGTGA
CCAAAAAAACTTCGTCAACTATGGTGGGGTTGGTGGCTTTTCTGGCATTGGTGACAGTGGACTCCCCTTTGGAGGGGCTGGGGGCGTTGTCGGGTTCGGCGGTGGCAGTG
GCATTGGCGGTGGCATTGGTGGACTCGGAGGGGGTGGTGGTTTAGGTGGGCTGGGCGGTGGCATTGGCGGACATGGAGGAGGTGGTGGCTTAGGCGGGCTCAGTGGTGGC
ATTGGTGGACTCGGAGGGGGTGGTGGCTTAGGCGGGCTCGGTGGTGGCATTGGTGGATACGGTGGGGGTGGTGGCTTAGGCGGGCTCGGCGGTGGCATTGGTGGATATGG
TGGGGGCGGTATCGGAATTGGAGTTGGTGGAGGATTTGTCAAGATCCCTTAA
Protein sequenceShow/hide protein sequence
MANELILVMAMAMVMVAFAGCVTARTAPNDGAKSVSDQKNFVNYGGVGGFSGIGDSGLPFGGAGGVVGFGGGSGIGGGIGGLGGGGGLGGLGGGIGGHGGGGGLGGLSGG
IGGLGGGGGLGGLGGGIGGYGGGGGLGGLGGGIGGYGGGGIGIGVGGGFVKIP