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Carg08942 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg08942
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsyntaxin-related protein KNOLLE
Genome locationCarg_Chr02:9601977..9602303
RNA-Seq ExpressionCarg08942
SyntenyCarg08942
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006887 - exocytosis (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR006011 - Syntaxin, N-terminal domain
IPR010989 - SNARE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606350.1 Syntaxin-related protein KNOLLE, partial [Cucurbita argyrosperma subsp. sororia]4.1e-50100Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        EMDNIE
Subjt:  EMDNIE

KAG7036293.1 Syntaxin-related protein KNOLLE, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-51100Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIETM
        EMDNIETM
Subjt:  EMDNIETM

XP_004147530.1 syntaxin-related protein KNOLLE [Cucumis sativus]2.0e-3679.25Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQSLRQRMMTEYKETV +RYFTVTGEHP EEV EKII +G EEFL RAIEEHG+GKVAET+ EIQ RHG  KEI+K LLELH+ FLDMAVM EAQG+
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        +MD+IE
Subjt:  EMDNIE

XP_023518336.1 syntaxin-related protein KNOLLE-like [Cucurbita pepo subsp. pepo]2.6e-3678.3Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQ+LRQRMMTEYKETV +RYFTVTGEHP EEV EKII +G EEFLGRAIEEHG+GKVAET+ EIQ RHG  KEI++ LLELH+ FLDMAVM EAQG+
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        +MD+IE
Subjt:  EMDNIE

XP_038881435.1 syntaxin-related protein KNOLLE [Benincasa hispida]2.6e-3678.3Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQSLRQRMMTEYKETV +RYFTVTGEHP EEV EKII +G EEFLG+AI+EHG+GKVAET+ EIQ RHG  KEI+K LLELH+ FLDMAVM EAQG+
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        +MD+IE
Subjt:  EMDNIE

TrEMBL top hitse value%identityAlignment
A0A0A0KWP3 t-SNARE coiled-coil homology domain-containing protein9.6e-3779.25Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQSLRQRMMTEYKETV +RYFTVTGEHP EEV EKII +G EEFL RAIEEHG+GKVAET+ EIQ RHG  KEI+K LLELH+ FLDMAVM EAQG+
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        +MD+IE
Subjt:  EMDNIE

A0A1S3B445 syntaxin-related protein KNOLLE2.1e-3678.3Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQSLRQRMMTEYKETV +RYFTVTGEHP EEV EKII +G EEFL RAI+EHG+GKVAET+ EIQ RHG  KEI+K LLELH+ FLDMAVM EAQG+
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        +MD+IE
Subjt:  EMDNIE

A0A5A7UY08 Syntaxin-related protein KNOLLE2.1e-3678.3Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQSLRQRMMTEYKETV +RYFTVTGEHP EEV EKII +G EEFL RAI+EHG+GKVAET+ EIQ RHG  KEI+K LLELH+ FLDMAVM EAQG+
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        +MD+IE
Subjt:  EMDNIE

A0A6J1EAY4 syntaxin-related protein KNOLLE-like4.7e-3677.36Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQ+LRQRMMTE+KETV +RYFTVTGEHP EEV EKII +G EEFLGRAIEEHG+GKVAET+ EIQ RHG  KEI++ LLELH+ FLDMAVM EAQG+
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        +MD+IE
Subjt:  EMDNIE

A0A6J1HP85 syntaxin-related protein KNOLLE-like1.1e-3577.36Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ
        MMEFQ+LRQRMM EYKETV +RYFTVTGEHP EEV EKII +G EEFLGRAIEEHG GKVAET+ EIQ RHG  KEI++ LLELH+ FLDMAVM EAQG+
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQ

Query:  EMDNIE
        +MD+IE
Subjt:  EMDNIE

SwissProt top hitse value%identityAlignment
O64791 Syntaxin-1242.8e-2554.63Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG
        M  FQ LR RM  EYKETV +RYFT+TGE  +E+  E +I SG  E FL +AI+E G+G++ +T+ EIQ RH  VKEI+K L+ELH+ FLDMA + E+QG
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG

Query:  QEMDNIET
        Q++++IE+
Subjt:  QEMDNIET

Q42374 Syntaxin-related protein KNOLLE1.4e-3268.52Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIIL--SGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQ
        MMEFQ LRQ+MM+EYKETV +RYFTVTGEH N+E+ EKII   +G EEFL RAI+EHG+GKV ET+ EIQ R+   KEI+K LLELH+ FLDMAVM E+Q
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIIL--SGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQ

Query:  GQEMDNIE
        G++MD IE
Subjt:  GQEMDNIE

Q9SXB0 Syntaxin-1254.3e-2656.48Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG
        M  FQ LR RM  EYKETV +RYFT+TGE  +E+  + +I SG  E FL +AI+E G+G++ +T+ EIQ RH  VKEI+K LLELH+ FLDMA + EAQG
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG

Query:  QEMDNIET
        Q+++NIE+
Subjt:  QEMDNIET

Q9ZQZ8 Syntaxin-1239.6e-2657.41Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG
        M +FQ LR +M TEYKETV +RYFTVTG+  +EE  EK+I SG  E FL +AI+E G+G+V +T+ EIQ RH  VKEI++ LLELH+ FLDMA + EAQG
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG

Query:  QEMDNIET
          +++IE+
Subjt:  QEMDNIET

Q9ZSD4 Syntaxin-1211.5e-2351.85Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG
        M  F  LR+ + +EY+ETV +RYFTVTGE+P+E   +++I +G  E FL +AI+E G+G+V +T+ EIQ RH  VK+I+K L ELH+ FLDMAV+ E QG
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG

Query:  QEMDNIET
         ++D+IE+
Subjt:  QEMDNIET

Arabidopsis top hitse value%identityAlignment
AT1G08560.1 syntaxin of plants 1119.8e-3468.52Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIIL--SGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQ
        MMEFQ LRQ+MM+EYKETV +RYFTVTGEH N+E+ EKII   +G EEFL RAI+EHG+GKV ET+ EIQ R+   KEI+K LLELH+ FLDMAVM E+Q
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIIL--SGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQ

Query:  GQEMDNIE
        G++MD IE
Subjt:  GQEMDNIE

AT1G11250.1 syntaxin of plants 1253.0e-2756.48Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG
        M  FQ LR RM  EYKETV +RYFT+TGE  +E+  + +I SG  E FL +AI+E G+G++ +T+ EIQ RH  VKEI+K LLELH+ FLDMA + EAQG
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG

Query:  QEMDNIET
        Q+++NIE+
Subjt:  QEMDNIET

AT1G61290.1 syntaxin of plants 1242.0e-2654.63Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG
        M  FQ LR RM  EYKETV +RYFT+TGE  +E+  E +I SG  E FL +AI+E G+G++ +T+ EIQ RH  VKEI+K L+ELH+ FLDMA + E+QG
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG

Query:  QEMDNIET
        Q++++IE+
Subjt:  QEMDNIET

AT3G11820.2 syntaxin of plants 1211.1e-2451.85Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG
        M  F  LR+ + +EY+ETV +RYFTVTGE+P+E   +++I +G  E FL +AI+E G+G+V +T+ EIQ RH  VK+I+K L ELH+ FLDMAV+ E QG
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG

Query:  QEMDNIET
         ++D+IE+
Subjt:  QEMDNIET

AT4G03330.1 syntaxin of plants 1236.8e-2757.41Show/hide
Query:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG
        M +FQ LR +M TEYKETV +RYFTVTG+  +EE  EK+I SG  E FL +AI+E G+G+V +T+ EIQ RH  VKEI++ LLELH+ FLDMA + EAQG
Subjt:  MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGR-EEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQG

Query:  QEMDNIET
          +++IE+
Subjt:  QEMDNIET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGTTTCAGAGCCTAAGGCAGAGGATGATGACTGAGTACAAGGAAACAGTCTGGCAAAGATACTTCACGGTGACAGGAGAGCACCCGAATGAGGAGGTGACAGA
GAAGATAATATTGAGTGGCAGGGAGGAGTTTTTGGGGAGGGCGATAGAGGAACACGGGCAGGGAAAGGTGGCAGAGACGATGAAGGAGATACAGGTCCGACACGGGGTGG
TGAAGGAGATAGATAAGCGCTTGCTAGAGCTGCACAAAGAGTTTTTGGACATGGCAGTGATGGCGGAGGCACAAGGGCAGGAAATGGATAACATTGAAACAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGTTTCAGAGCCTAAGGCAGAGGATGATGACTGAGTACAAGGAAACAGTCTGGCAAAGATACTTCACGGTGACAGGAGAGCACCCGAATGAGGAGGTGACAGA
GAAGATAATATTGAGTGGCAGGGAGGAGTTTTTGGGGAGGGCGATAGAGGAACACGGGCAGGGAAAGGTGGCAGAGACGATGAAGGAGATACAGGTCCGACACGGGGTGG
TGAAGGAGATAGATAAGCGCTTGCTAGAGCTGCACAAAGAGTTTTTGGACATGGCAGTGATGGCGGAGGCACAAGGGCAGGAAATGGATAACATTGAAACAATGTGA
Protein sequenceShow/hide protein sequence
MMEFQSLRQRMMTEYKETVWQRYFTVTGEHPNEEVTEKIILSGREEFLGRAIEEHGQGKVAETMKEIQVRHGVVKEIDKRLLELHKEFLDMAVMAEAQGQEMDNIETM